KEGG T02189: BN140

Methanoculleus bourgensis: BN140_0625

Entry

BN140_0625 CDS T02189

Gene name

lig3

Definition

DNA ligase 1 (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mbg Methanoculleus bourgensis

Pathway

mbg03030	DNA replication
mbg03410	Base excision repair
mbg03420	Nucleotide excision repair
mbg03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mbg03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mbg03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mbg03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mbg03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

397779791

NCBI-GeneID:

13354285

UniProt:

I7J7N3

Position

632388..634136

AA seq 582 aa
MKFATLASCFERLNVTSSRNDMTALLARLLAGASPDEIGIVCYFTLGAIAPGYSGLTPGI
GERTAAAAIALAGSVDPAAVEAAARELGDYGDAAARLTVAPPEGSTGPLRVTDVHRGFME
IARASGPGSADRKTRVLAAMLAAATPPERRYLVRLATGEMRLGVGDMTLLDALAEAFLGS
KAERPPLEHAYNISSDVGLVARTLQESGLAGVSAIPVTLHHPIRPMLTQRVSRISEIPER
IGSRVIAVEEKYDGERVQAHKDGDDVTLFSRRLTDVTHQYPDIVRHIRRCVTADTAILDG
EAVAFDHETGTYRPFQTLMRRRRKHRVREVAGEIPATYRVFDLLYVNGESYLRRSYPDRR
ARLEEVLSPDEKISPADRTLTGDLDGITEFYLACIERGLEGVVCKSCAEDSFYRAGAREW
QWIKWKSDYGTELADTLDLVVVGANAGRGKRAGTYGSVLCAAYNHEEDIFQTVCGMGTGF
TDADLADLPRRFAGVRVDRQPARVMVTPQAVPDFWFAPARVVEVLGLEITESPVHTCNWD
PEWRRGLALRFPRFVRWRDEKSPEAATTTAEVAAMFRRRREG

NT seq 1749 nt +upstreamnt +downstreamnt
gtgaaattcgcaacccttgcctcctgctttgagaggctaaacgtcacatcgtcccggaac
gatatgaccgccctcctcgcgcggctcctcgccggggcgtctccggacgagatcggcatc
gtctgctacttcacgctcggggcgatcgcgccaggatacagcgggttgaccccgggcatc
ggggagcggaccgcagcggcggcgatcgcccttgcgggcagcgtcgaccctgcagcggtc
gaggcggcggcccgggaactcggcgactatggggacgccgccgcccgcctgaccgtggcg
cccccggagggatccaccggaccgctcagggtcacggacgtccaccgcggctttatggag
atcgcccgggcatcgggtcctggttcggccgaccggaagacgcgggttctcgccgcgatg
ctcgccgccgccacgcccccggagcggcgctacctggtcaggcttgccaccggggagatg
cggctcggcgtcggggatatgacgctcctcgatgcgctggcggaggcgttcctggggtcg
aaggcagagcgcccgcccctcgagcacgcctacaacatctcttcagacgtcggcctcgtg
gcccggacgctccaggaatcgggtctcgcgggggtctcggcgataccggtcaccctgcac
caccccatcaggccgatgctcacccagcgggtctcccggatatcagagatccctgagcgg
atcggctcccgggtcatcgccgtcgaggaaaagtacgacggtgagcgggtccaggcccac
aaagacggcgacgacgtcaccctcttctcacggcggctgactgatgtcacccaccagtat
cccgacatcgtccggcacatccggcggtgcgtcacggccgatacggcgatcctcgacggc
gaggcggtcgcgttcgaccacgagaccgggacctaccggcctttccagaccctgatgcgg
cggcgccggaagcaccgggtcagggaggtcgccggtgagatccccgcgacctaccgggtc
ttcgacctcctctacgtgaacggcgagtcatacctccgccggagttacccggaccggcgt
gcgaggctcgaagaggtcctctcccctgatgaaaagatatccccggcagaccgcaccctg
accggggatctcgacgggatcacggagttctaccttgcctgcatcgagcgggggcttgaa
ggggtcgtctgcaagtcgtgcgcggaggactcgttctaccgggcgggggcgcgggaatgg
cagtggatcaagtggaagagcgattacggaaccgaacttgccgacacgctcgacctggtc
gtcgtcggcgccaacgccgggcgcgggaagcgggccgggacctacggatcggtcctctgc
gccgcctacaaccatgaggaggatatcttccagacggtctgcggcatggggacggggttt
accgatgcagacctggcagacctcccccgacggttcgccggtgtccgggtggaccggcaa
cctgcccgggtgatggtgaccccacaggccgtgcctgacttctggttcgcaccggcccgg
gtggtcgaggtgctggggcttgagatcaccgaaagcccggtccatacctgcaactgggac
cccgagtggcggcgggggcttgccctcaggttcccaaggtttgtgcggtggcgggacgag
aagagcccggaagcggcaacgacgaccgccgaggtcgcggcgatgttccgcaggcggcgg
gaggggtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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