KEGG T02143: Mbov

Mycoplasmopsis bovis HB0801: Mbov_0313

Entry

Mbov_0313         CDS       T02143

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mbi Mycoplasmopsis bovis HB0801

Brite

KEGG Orthology (KO) [BR:mbi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbi03032]
    Mbov_0313 (topA)
   03400 DNA repair and recombination proteins [BR:mbi03400]
    Mbov_0313 (topA)
Enzymes [BR:mbi01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Mbov_0313 (topA)
DNA replication proteins [BR:mbi03032]
Prokaryotic type
  DNA Topoisomerases
   Mbov_0313 (topA)
DNA repair and recombination proteins [BR:mbi03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Mbov_0313 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim zf-C4_Topoisom Toprim_4

Other DBs

NCBI-ProteinID:

AFM51681

Position

complement(369280..371118)

AA seq 612 aa
MVIVESPNKVETIKKYLGDDFNVMASVGHIARLSKKGSMGLGIDMEKWEPEFEIDPTKKD
VVKHLKAAVKDADFVYIATDPDREGEAIGDHLVKYLKCKEGKYARIKYNEITKDAILYSV
ENPTKLDQNLIDAQKTRRMLDRIIGFRLSQLMQKKLSNSPATPSAGRVQSIALKLVVDRE
KEIESFVPRDYYSVEALISDSLIASIYMSKHNASEKTWVFPEEIESVKKSIDIEPTNILV
VKDIKESKKTLPALTPFKQAVLYKRSPFSSSITQASLQRLYEGFGDGGLISYPRTDSTRL
SHTFVNATKNYISIKYGDEYVLDKVKGFKGDQDAHEAIRPTDITLLPDEAKNKYDLNNYD
YQIYKLIYEHTLMCLITPPLRANKTYKFLKDKLDFRLNVSWVLFDGYYVVKGEMNENCDP
DYKIGQTVNVKEFKIENKETKPPARYSEGSLIEKLDDIKVGRPSTFATTVKIILNREYVK
SENSALVPTDFGKLILDKLIQGFPDIINEGYTAEVENQLDLIATNKIAVQPVMEDFYNKF
KNNYENAAQNLDHTSMSLQKVDETCPNDNGNLVIRRNKRGDKFIACDNFPRCNFTKSYDD
GSNKKRFYRKKS

NT seq 1839 nt +upstreamnt +downstreamnt
ttggtaattgttgaatctccgaataaagtggaaactatcaaaaagtatttaggtgatgat
tttaatgttatggcttctgttggtcatatagcaagattaagtaaaaaaggctcaatgggc
ttaggtatagatatggaaaaatgagaacctgagtttgaaattgatcccactaaaaaagat
gttgttaaacatttaaaagcagctgttaaagatgctgattttgtttatattgcaactgac
cctgatcgtgaaggtgaagcaattggcgatcacttagttaagtatttaaaatgcaaagaa
ggaaaatatgcaagaattaaatataatgagataactaaggacgccatcctatattcagtt
gaaaatcctacaaaactagatcaaaatttaattgatgcacaaaaaactagaagaatgtta
gatagaattatcggatttagactaagtcaactaatgcagaaaaaactatcaaactctcct
gctacaccttcagctggtagagtccaatcaattgcacttaaattagttgttgatagagaa
aaagaaattgagagctttgtccctagagactattattcagtggaggcattaatttcagat
tcattaattgcttcaatttatatgtcaaagcacaatgcatctgaaaaaacatgagtattt
cctgaagaaatagaatcagttaaaaagagcattgatattgagccaactaacatccttgtt
gttaaagatattaaagaatctaaaaaaacattaccggctcttactccttttaaacaagct
gttttatacaaaagaagtccatttagttcatcaataactcaagcatcgcttcaaagactt
tacgaaggttttggtgatggtggtttgattagctatccgcgtacagatagtactagacta
agccatacatttgttaatgcaactaagaattatatttctattaagtatggtgatgaatat
gttttagataaagtaaaaggttttaaaggcgatcaagatgctcatgaagctattaggccc
actgatataactcttttacctgatgaagctaaaaataaatatgatctaaataattatgac
taccaaatttataaattaatttacgagcacacacttatgtgtttaataactccgccatta
agagctaataaaacatataagtttttaaaagataaattggactttagactaaatgtaagt
tgagtgctttttgatggttattatgtagttaaaggtgaaatgaatgaaaactgcgatcct
gactataaaataggccaaacggtcaatgttaaagagtttaaaattgaaaacaaagaaact
aaaccgcctgctagatattcagaaggatcattaattgaaaaattagatgatattaaagtt
gggcgcccttcaacatttgctacaactgttaaaataattttgaacagagaatatgttaag
tctgaaaattctgccttagttcctactgattttggcaaattaattctggacaaattaatt
caaggttttccagatattattaatgaaggttatactgctgaagttgaaaatcaattagat
cttatcgcaactaataaaatcgcagtacaaccagtaatggaagacttttataataaattt
aaaaataactatgagaatgctgcacaaaacttagatcatacatcaatgagtttgcaaaaa
gttgatgaaacatgtccaaatgacaacggaaacctagttataagaagaaataaaagaggg
gataaatttattgcctgcgataatttccctagatgtaactttacgaaaagttatgatgat
ggatctaacaaaaagagattttatagaaaaaaaagttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system