KEGG   Methanoregula boonei: Mboo_0649
Entry
Mboo_0649         CDS       T00578                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mbn  Methanoregula boonei
Pathway
mbn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mboo_0649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbn03019]
    Mboo_0649
   03009 Ribosome biogenesis [BR:mbn03009]
    Mboo_0649
Messenger RNA biogenesis [BR:mbn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mboo_0649
Ribosome biogenesis [BR:mbn03009]
 Prokaryotic type
  rRNA helicases
   Mboo_0649
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 CMS1 AAA_30 Helicase_RecD
Other DBs
NCBI-ProteinID: ABS55167
UniProt: A7I606
Position
complement(615196..616794)
AA seq 532 aa
MNTRLQFSDLSLSKEIAKAIENMGFEEPTPIQALAIPLIQAGRDVTAQAQTGTGKTSAFG
IPVIENIDASQRVVQVIVLCPTRELAIQIAEEFSHLLAYLPKISVLPVYGGQPIERQLKA
LANGVHIVIGTPGRVMDHLKRRTLSLDHVSMVVLDEADQMLDMGFRDDIELILKRVPQKR
QTLLFSATLPKPIIEISKRFQNRPEFVRVEYQELTVPAIEQSYIEVRDRDKLDSLCRVID
VVDPQLAIIFCNTKRGAEDLAGRIRARGYRAEELHGDMKQSQRDRVMGGFRKGTIDILIA
TDVAARGIDVEDVDMVINYDVPQDVDYYIHRIGRTGRAGKSGRAITFVTSRDFTKLREIQ
KYIKVQIPRKPLPTADDVVEQKTKTILEEVRETIQKGGTEPYARIVEQESEGDLTTLEIA
AALLKIRLEQGSDSHTEHAVPKDFGDTGAESGMVRFFLGIGRDHKVAPKDIVGAIAGETG
IPGKYIGAIRILDTYSFVEVPREYAGEVYTIMKERTIRGLSTAIEPAQGRHP
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgaatacaagattgcagttttccgatctctccctctcaaaagagatcgcgaaagccata
gaaaatatgggctttgaagagcccacccccatccaggcacttgccattccccttatccag
gccggccgcgatgtgaccgcgcaggcacagaccggtaccggaaagacctccgcgtttggc
atccccgttatagaaaatatcgatgcttcacaacgggtcgtgcaggtcatcgttctgtgc
cccacccgggaactcgccatccagatcgccgaggaattttcccatctcctcgcctacctc
ccaaaaatctccgttctcccggtctatggcggccagcccatagaacgccagctcaaggcc
cttgcaaacggtgtccacattgtgattggcactcccgggcgtgtgatggatcacctcaag
cgccgtaccctctcacttgaccatgtctcgatggttgtgctcgacgaggcggaccagatg
cttgacatgggattccgggacgatatcgagctcattttaaagcgcgtaccccagaaacgc
cagacgcttctcttctctgcaacgctccccaagccgatcatcgagatctcaaaaaggttc
cagaaccgtcccgaatttgtccgggtcgagtaccaggagctcaccgttcctgcgatcgag
cagtcctatattgaagtcagggaccgggacaagctcgattctctctgccgggtgatcgat
gtcgttgacccgcagcttgctatcattttctgcaacacaaaacggggcgcagaagacctt
gccggccgcatccgggcacggggttaccgcgcagaagagctccacggggatatgaaacag
tcccagcgcgaccgggtcatgggagggttccggaagggtaccatcgatatcctgatcgca
accgatgttgctgcgcgcggaatagatgtcgaagatgtggacatggtgatcaactatgat
gtcccgcaggacgttgattactacatccaccggattggcaggacggggagggcaggaaag
agcgggcgggcgatcacctttgttacgtcccgcgatttcaccaagctccgcgagatccag
aaatacataaaagtccagatccccagaaaacccctgcccacggctgacgatgtggtcgag
caaaaaacaaagactatactcgaagaggtacgcgagaccatccagaagggaggtaccgag
ccgtatgcccggattgttgagcaggagagcgaaggggatctcaccacgcttgagatcgct
gcagcccttttaaaaatacgcctggaacagggaagcgattcccataccgagcacgcggtt
ccgaaggatttcggggataccggtgcagaatcaggcatggtaagatttttcctgggtatc
ggccgcgaccacaaggtggcacccaaggatattgtcggggccattgccggggaaacaggt
atcccgggaaaatacatcggcgcaataaggatcctcgatacatattcctttgtcgaagta
ccccgggagtatgcgggtgaggtctatacgattatgaaagagcggacgatccggggactc
tccacggcaatagagccggcacagggccggcacccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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