KEGG   Monosiga brevicollis: MONBRDRAFT_8754
Entry
MONBRDRAFT_8754   CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mbr  Monosiga brevicollis
Pathway
mbr03020  RNA polymerase
mbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MONBRDRAFT_8754
  09124 Replication and repair
   03420 Nucleotide excision repair
    MONBRDRAFT_8754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_8754
   03400 DNA repair and recombination proteins [BR:mbr03400]
    MONBRDRAFT_8754
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     MONBRDRAFT_8754
DNA repair and recombination proteins [BR:mbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MONBRDRAFT_8754
SSDB
Motif
Pfam: TFIIS_C Menin RNHCP
Other DBs
NCBI-GeneID: 5891545
NCBI-ProteinID: XP_001746466
JGI: 8754
UniProt: A9V115
AA seq 131 aa
MGLFLRHANSNNMLAPMEKNNEESGEFKLVYTCKYCRKYEEDADNNCTYVSRAIQEVDNL
AQINADVRDDPTLPHEDDIECPKCSVKDAVFFQAQSHRDQVGPDAGKGHDQPLWPDMSLF
MILRCAIAPSL
NT seq 396 nt   +upstreamnt  +downstreamnt
atgggcctctttttgcgacacgccaacagcaacaacatgcttgctccaatggagaagaac
aacgaggaaagcggcgagttcaagttggtgtatacgtgtaaatactgccgcaagtatgaa
gaggatgcggacaacaactgcacctacgtcagccgtgccattcaggaagtcgacaacttg
gcccaaatcaatgccgatgtgcgtgatgacccgacactgccccatgaagacgatattgag
tgccccaagtgctcagtcaaggatgccgtgttcttccaagcccagagccatcgtgaccag
gtagggcctgatgccggcaaaggccacgatcaaccactttggcctgacatgtccctcttc
atgattctccgttgcgccattgcgccatccctctga

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