KEGG T00341: Mbur

Methanococcoides burtonii: Mbur_1088

Entry

Mbur_1088 CDS T00341

Definition

DNA ligase I, ATP-dependent (dnl1) (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mbu Methanococcoides burtonii

Pathway

mbu03030	DNA replication
mbu03410	Base excision repair
mbu03420	Nucleotide excision repair
mbu03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mbu03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mbu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mbu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mbu03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1166020..1167723

AA seq 567 aa
MTDFKEFADVCKQIEHISSSLEMTDVVSDMLKSISTEELPVVTHFVMGDVFPAWSVEQLG
VGTSLLYSALSESSGLSLKEIEDLVRSTGDIGETAVAALGKKKKNKKKNQASLSFFSEDA
ASVSISIMDVFERFLDISRYSGAGSQSSKMRNLQFLFNSSSSEEARYLARLTIEDLRIGV
GEGIVRDAISKAFDVPAGDIERGFMLTNDLGLVAVAAKEGGIEEISKLRMELDRPIKMML
AQVTPSIEAAIKDLGMLAVEWKFDGARVQIHKKGDSINIFSRRLENVTLSLPDIVEAVKL
HVKADSAILEGEAVAVDENGAPRAFQDILKRFRRKYDVETMVREIPLTLNLFDILYLNGD
VLMDQSLLRRREQLVACVENCDSIKVDEQVLTDDVNVVNDIYAAALNGGHEGVMLKNPEA
SYSPGKRGKNWLKKKPIMETLDLVVIAAEWGYGKRANLIGSYALACFDPEDGKFLPIGKV
ATGFSDEQLAELTEVFSELIIGESGREIELKPDVVFEIAFEEIQKSTNYGSGYALRFPRL
VNVREDKSPEEAETIDRIESIYLSQRG

NT seq 1704 nt +upstreamnt +downstreamnt
atgaccgacttcaaggaattcgctgatgtttgtaaacagatagaacatatctcaagttca
ctggaaatgacagatgttgtctcggatatgttaaagtcgatatcgacagaggaacttcct
gttgtgacccattttgtgatgggggacgtttttcctgcatggagtgttgaacagcttggg
gtgggtacgagtcttttgtatagtgccctttcggaatcatccggtctttccctgaaagag
attgaggaccttgtccgttccaccggtgatataggggagacagcggtagcagcacttggt
aagaagaaaaagaataagaaaaagaatcaagcatcgctctcatttttttcggaggatgca
gcttctgtctctatctccataatggatgtctttgaaaggttccttgatatttccagatat
tcaggtgcaggttcgcagagttctaagatgaggaaccttcaattccttttcaattcttcc
agctccgaagaagcacggtatcttgcccgactgactatcgaagaccttcgtattggtgtc
ggtgaaggtatcgttcgtgatgctatttcaaaagctttcgatgttccggcaggggatatt
gaacgtggttttatgttaacgaacgatctgggtcttgtggcagttgctgcaaaagagggt
ggtattgaggagatatcaaagctcaggatggagcttgatcgtccgataaagatgatgctg
gcacaggttacgcctagtattgaagctgcgatcaaggatcttggtatgctggctgtcgag
tggaaattcgatggggcaagggttcaaattcataagaaaggggattcgatcaacatcttt
tcgagaaggcttgagaatgtgacattatctctgccggatatcgttgaggcagtgaagctt
catgtgaaggcggattccgcaattctggaaggtgaggctgtagcggtcgatgaaaatggg
gctcctcgtgctttccaggatatactcaaacgcttcaggagaaagtatgatgttgaaaca
atggttcgtgagatacctttgacattgaaccttttcgatattctgtatctgaatggggat
gtactgatggaccagtctcttttaagaagaagggaacaactggtcgcatgtgtggagaac
tgtgatagcatcaaggtggatgagcaggttctcacagatgatgtgaatgttgtgaacgat
atatatgctgctgcgcttaacggtgggcacgaaggggtcatgctaaagaacccggaagct
tcgtattctcccggcaagcggggtaagaactggctcaagaagaagcctatcatggagacg
ctcgacctcgttgtcattgctgcggaatggggttatggaaaacgtgcaaatcttatcggc
tcttatgctctggcatgttttgacccggaagatggaaaattccttccgatcggcaaagta
gctacaggtttttcagatgagcagcttgctgaacttactgaggtcttttccgagcttatt
attggtgaatccggtcgggagatcgaacttaaacctgatgtggtgttcgagatcgcattc
gaggagatccagaaaagtacgaactatggttcaggatatgctctccgtttccctcgactt
gtaaatgtgagggaagataaatctccggaagaggctgaaacgatagatcgtatcgagagc
atctatttatcacagaggggctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MBU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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