KEGG   Mycoplasmopsis bovis PG45: MBOVPG45_0634
Entry
MBOVPG45_0634     CDS       T01366                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mbv  Mycoplasmopsis bovis PG45
Pathway
mbv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MBOVPG45_0634 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbv03019]
    MBOVPG45_0634 (rnr)
   03016 Transfer RNA biogenesis [BR:mbv03016]
    MBOVPG45_0634 (rnr)
Enzymes [BR:mbv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     MBOVPG45_0634 (rnr)
Messenger RNA biogenesis [BR:mbv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MBOVPG45_0634 (rnr)
Transfer RNA biogenesis [BR:mbv03016]
 Prokaryotic type
  tRNA degradation factors
   MBOVPG45_0634 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2 OB_RNB HTH_24 Dynactin_p22 3H
Other DBs
NCBI-ProteinID: ADR25423
UniProt: A0A454AQV3
Position
728104..730293
AA seq 729 aa
MINEKIIINTIKENPHISTNALLRKLNISPRHNKVLTNMLINLSSRDLIAYDKRDSTYVA
LKKLNTIQGPIHFASEGKCAFIDVEELSKTEAKVSYFVSSNNFNTALNNDIVEAEVFEPI
SPNNNRTFAKVKKIIERKCKTLIGVLDNVNGFVTFKPIEPIYKNTSFRIKNIANEARILD
VVVAEIINYENRNKEINIVKRITDVNDPMAYVKSLEEARNVPKDFPAEVNKYIDEFIPNN
IKNEDLSTRMDLRNELVVTIDGSSTKDFDDAISVVKIDDNTYELGVHIADVAYYVKENTP
LDDEALKRGTSIYLLNEVVPMLPFKLSNGICSLNPNEERLTISCITKINKEGKSISTKIV
PSVIKSKYRLTYERVNEFINDSKVFDDDKLNEMLKNAYELSKIVREFKNKQGYIDFEIQE
PYIELDADGRVIDISVEQTGESEKMIEDFMVRANEEVAKFITDLKLPMMYRIHEVPSEEK
IEYFTDVLKSLKINVSLNRKHITPLSFQKVINQINSQRNDEFLKMLFLRTMQKAVYSPEN
IGHFGLASDCYCHFTSPIRRYPDVIVHRILWEFVFKKQLNKVEDFAANLQKIAAMNSASE
ENAVQLERDVNDLKFAEYFKSKINSEFEGQVFGITKFGMFIQFANKTDAMVHISNIGDGD
YEVNEQMTKLYSRNDPKKAYKLGQTVRVVITNADETTGKIDCVLTQDYQTYLKNKISKNF
NQSKGFNKR
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgattaatgaaaaaataataattaacaccataaaagaaaatccacatatatcaacaaat
gcattattaagaaagctaaacattagccctagacataataaggttttgaccaatatgctt
ataaatctgtcgtctagggatttgattgcatatgacaagagagattcaacatatgtggca
ttaaaaaaactaaatacaattcaaggcccgatacactttgcttctgaaggaaagtgtgct
tttattgatgttgaagagttaagtaaaactgaagctaaggtttcttattttgtttctagc
aacaactttaatacagcattaaataatgatattgtcgaagctgaagtttttgaaccaatt
agtccaaataataatagaacctttgcaaaggttaagaaaataattgaaagaaaatgcaaa
accttaattggcgttttagataatgttaatggttttgttactttcaaacctattgagcca
atttacaaaaatactagttttagaatcaaaaatattgctaatgaagcaagaattttagat
gttgttgttgccgaaataattaactatgaaaatagaaacaaagaaataaatatagttaaa
agaataactgatgttaatgatccaatggcttatgttaagtcattggaagaagctagaaat
gtaccaaaagatttcccggctgaagttaataaatacattgatgagtttattcctaacaat
ataaaaaatgaagatctaagcacacgtatggacttaagaaatgaattagttgttacaatt
gacggctctagtactaaagactttgatgatgctattagcgttgtcaaaattgacgataat
acctatgaattaggcgtgcacattgctgatgtagcatattatgtaaaggaaaatacacct
ttagatgatgaagctttaaaaagaggaactagtatttatcttctaaatgaggtagtgcca
atgttaccttttaaattatcaaatggcatctgctcacttaatccaaatgaagaaagattg
actataagttgcattaccaaaataaacaaagaaggtaaaagcattagtaccaaaattgtt
ccatcagtaattaagtcaaaatataggcttacatatgaaagagttaatgaatttattaat
gattcaaaggtttttgatgatgataagcttaatgaaatgctgaaaaatgcatatgaattg
tccaaaattgttagagaatttaaaaacaaacaaggatatattgacttcgaaattcaagaa
ccttacattgaattagatgctgatggacgtgttattgacattagcgtagaacaaacaggc
gaatctgaaaaaatgattgaagactttatggtgcgagcaaatgaagaagttgctaaattt
attacagatttaaaactgccaatgatgtatagaatacacgaagttcctagtgaagagaaa
atagaatactttactgatgtattgaaatcgttaaaaataaatgtttcattaaacagaaaa
catataactccactatcatttcaaaaggtaattaatcaaataaatagtcaaagaaatgat
gagttcttaaaaatgctttttttaagaacgatgcagaaagcagtctattcacctgaaaat
ataggtcactttggactagctagtgattgctattgccattttactagccctattagaaga
tatcctgatgtaattgttcatagaattttatgagagtttgtttttaaaaaacaattaaat
aaagtagaagattttgctgctaacttgcaaaaaatagcagccatgaactcagctagtgaa
gaaaatgcagtgcaactagagcgggatgtaaacgatcttaagtttgccgaatatttcaaa
agcaaaattaatagtgagtttgagggccaagtttttggcattactaagtttggtatgttt
atccagtttgcaaacaaaacagatgcaatggttcatataagtaatattggtgatggggac
tatgaagttaatgaacaaatgaccaagttatatagtcgtaatgatcccaaaaaggcctat
aaattaggtcaaacagtcagagtcgtaatcaccaatgctgatgaaactacaggcaaaata
gactgtgttttaactcaggactatcaaacatacttaaaaaacaaaatatctaagaacttc
aatcaatctaaaggctttaataaacgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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