KEGG   Mycobacterium tuberculosis variant bovis BCG ATCC 35743: BCGT_2297
Entry
BCGT_2297         CDS       T03796                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
mbx  Mycobacterium tuberculosis variant bovis BCG ATCC 35743
Pathway
mbx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mbx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BCGT_2297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbx03400]
    BCGT_2297
Enzymes [BR:mbx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BCGT_2297
DNA repair and recombination proteins [BR:mbx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BCGT_2297
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS UstYa
Other DBs
NCBI-ProteinID: AHM08217
Position
complement(2441291..2442097)
AA seq 268 aa
MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADSASALNGRVLRRASAWGKHLFHHYVG
GPVVHVHLGLYGTFTEWARPTDGWLPEPAGQVRMRMVGAEFGTDLRGPTVCESIDDGEVA
DVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNVYRNELLFRHRIDP
QRPGRGIGEPEFDAAWNDLVSLMKVGLRRGKIIVVRPEHDHGLPSYLPDRPRTYVYRRAG
EPCRVCGGVIRTALLEGRNVFWCPVCQT
NT seq 807 nt   +upstreamnt  +downstreamnt
gtgcctgaggggcatacgctgcatcggctggcccggctgcaccagcgccggttcgccggt
gcgccggtctcggtgtccagcccccagggccggttcgccgattcggcttccgcgctcaac
ggtcgggtgttgcggcgggccagtgcctggggcaaacacctgttccatcactacgtcggc
ggccccgtggtgcacgtgcatctcgggctctatggcaccttcaccgaatgggcacgcccc
acagatgggtggctacccgaacccgcggggcaggtgcggatgcggatggtcggggcagaa
ttcggcaccgacttgcgcggcccgacggtgtgtgagtcgatcgacgacggcgaggttgcg
gacgtggttgccaggctgggacccgacccgttgcgtagcgacgccaacccgtcgtcggca
tggtctcggatcaccaagtctcgcaggcccataggcgcgctcttgatggaccaaacggtg
atcgccggtgttggcaacgtctaccgtaatgagttgctttttcggcaccggatcgaccca
cagcggcccggccgcgggatcggtgagccggaattcgacgcggcctggaacgatctggtg
tcgttgatgaaggtgggcttgcgccgcggcaagatcatcgtggtgcgccccgaacatgac
catggtctgccgtcatatctgcccgaccggccccgcacctatgtgtaccgccgagccggc
gagccgtgtcgggtgtgtgggggagtgatccgcacggcactgctcgagggccgcaatgtt
ttctggtgcccggtctgtcagacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system