KEGG   Methylococcus capsulatus: MCA1553Help
Entry
MCA1553           CDS       T00205                                 

Gene name
dapE
Definition
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
mca  Methylococcus capsulatus
Pathway
mca00300  Lysine biosynthesis
mca01100  Metabolic pathways
mca01120  Microbial metabolism in diverse environments
mca01230  Biosynthesis of amino acids
Module
mca_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mca00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    MCA1553 (dapE)
Enzymes [BR:mca01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     MCA1553 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M18
Motif
Other DBs
NCBI-ProteinID: AAU92186
UniProt: Q608D9
Position
1654485..1655618
Genome map
AA seq 377 aa AA seqDB search
MSDTLDLAVELIRRESVTPEDAGCMDLVIERLAPHGFQAEWLNFGDTKNLWLRRGEAAPL
FVFLGHTDVVPPGPLEDWSSPPFAPEIREGRLYGRGAADMKGSIAAMTTALQRFVVHHPG
HPGSLAVLLTSDEEGSAYDGVVKVVDVLKSRDTVIDWCLVGEPSSFARLGDVIRVGRRGS
LGGVLRILGVQGHVAYPDKADNPIHRFAPALHELTTEIWDGGNEFFPPTSFQVSNIRAGT
GADNVIPGKLEVLFNFRFSTELTVEAIQRRVETILDRHGLHYELSWRLSGLPFLTRETEL
VSATRAAIAAVTGLQPRADTGGGTSDGRFIAPTGAQVVELGPLNGSIHKIDEHVAVEDLE
ALSAIYERILGNLLAVL
NT seq 1134 nt NT seq  +upstreamnt  +downstreamnt
atgagcgacaccctcgatctcgccgtcgagctgatccggcgcgaatccgtgacccccgaa
gatgcgggctgcatggacctggtgatcgagcggctggcgccccatggcttccaggccgag
tggctgaatttcggtgacaccaagaacctctggctccgacgcggcgaagcggcgccgctc
ttcgtgttcctgggccataccgacgtggtgccgccgggtcccctggaagactggtcctcc
ccccccttcgcgcccgaaatccgcgaaggccgactgtacggacgtggcgcggccgatatg
aagggcagtatcgcagccatgaccacggccttgcagcggttcgtggtccaccaccccggg
cacccgggctccctcgccgtcctgctgaccagtgacgaagagggctcggcctacgacggc
gtggtcaaggtggtggatgtcctgaagtcgcgagacacggtgatcgactggtgtctggtc
ggcgagccgtcgagcttcgcccggctgggcgatgtgatccgggtgggccgccgaggctcc
ttgggcggcgtgctgcggatcctgggcgtgcagggccacgtcgcttatcccgacaaggcc
gacaaccccatccaccgcttcgctcccgcgcttcacgaactcactaccgaaatctgggac
ggaggcaacgaattcttccctccgaccagttttcaggtctccaacatccgggcgggaacc
ggcgccgacaacgtcatccccggcaaactcgaggttctgttcaacttccgtttttcgacc
gaactgaccgtggaggccatccagcgccgtgtggaaaccatcctcgaccgccacggcctc
cactacgaattgagctggcgactctccggtctgccgtttttgacccgggaaacggagctg
gtgagcgcgacccgtgccgccatcgccgcagtcaccggcctccagccgcgtgccgatacc
ggcggcggcacttccgatggccgcttcatcgccccgaccggtgcccaggtcgtggagctg
ggaccgctcaacggcagcatccacaagatcgatgagcacgttgcggtcgaagacctggaa
gccctgtccgcgatctacgaacgcatcctcggcaatctgctggcggtcctctga

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