KEGG   Mycolicibacterium chubuense: Mycch_2408
Entry
Mycch_2408        CDS       T02150                                 
Name
(GenBank) primosomal protein N' (replication factor Y) - superfamily II helicase
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
mcb  Mycolicibacterium chubuense
Pathway
mcb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mycch_2408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcb03400]
    Mycch_2408
Enzymes [BR:mcb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mycch_2408
DNA repair and recombination proteins [BR:mcb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mycch_2408
SSDB
Motif
Pfam: PriA_3primeBD LRR_10 zf-CHY
Other DBs
NCBI-ProteinID: AFM17181
UniProt: I4BIS4
Position
2479567..2481567
AA seq 666 aa
MTTTGQAAEHEPVARVLPMLTVPHLDRDFDYLVSADQSDDAQPGVRVKVRFHGRLVDAFI
LERRSDTDHVGKLGWLEKVVSPECVLTHDVRRLVDAVAARYAGTRADVLRLAVPPRHATV
EKRPPPHLEPLTPAPVDAAGWSVYTGGERFVAALQDGRAARAIWQALPGESWPARLAEAA
AVTVNSGRGVLAVVPDQRDVDRLHAAAVDRVDESRVVALSAGLGPAERYRRWLAVLRGDA
RLVIGTRSAVFAPVADLGLVVLWDDGDDSLAEPRAPYPHAREVAMLRAHQVRCAALIGGY
ARTAEAQALVVSGWAHDLTAPRQTVRARAPRVVALEDSAYAQERDPAARTARLPTMALDA
ARAALTRGAPVLVQVPRRGYVPALACARCRTIARCRHCTGPLSLPSRDAPGALCRWCGRE
DAALRCVRCGSDAVRAVVVGARRTAEELGRAFPGTTVITSGGDAVVESVPHRPAVVVATP
GVEPVADEGYGAALLLDSWALLGRQDLRAAEDTLRRWMAAAALVRSRADGGLVAVVAESA
IPTVQHLIRWDPVGHAEAELQSRTEVGLPPAAHIAAVDGAPLAVDALLDAADLPPQAELL
GPVDLPVGARRPAGIAAEHPVNRMLVRVPRDAGLALAAALRKASAVQSARHDQEPVRVQI
DPLHIG
NT seq 2001 nt   +upstreamnt  +downstreamnt
gtgacgaccaccgggcaggccgccgagcacgagccggtggcccgtgtgctgccgatgctg
acggtgccgcatctggatcgcgacttcgactacctggtgtcggccgaccagtccgacgac
gcccagcccggggtccgggtcaaggtgcggttccacggtcggctggtcgacgcattcatc
ctcgaaagacgttcggacacagaccatgtcggcaagctcggctggctggagaaagtggtg
tctcccgagtgcgtgctgacccacgatgtccgccggctggtcgacgcggtggcggctcgg
tatgccggcacccgcgcggacgtgctccggctggccgtgccgccccggcacgccaccgtg
gagaagcggcccccgccgcacctcgagccgctgacgccggccccggtggacgcggccggc
tggtcggtctacaccggcggtgagcgattcgtcgcggcgctgcaggacggacgcgcggcc
cgggcgatatggcaggcgctgcccggggagtcgtggcccgcgcggctggccgaggcggcc
gcggtgaccgtgaactcgggtcgcggcgtgctcgccgtggtaccggaccagcgcgatgtc
gaccggctgcacgcggccgcggtcgaccgggtcgatgagtcccgcgtcgtggcgttgtcg
gccggactcggcccggccgagcgttaccggcggtggctggcggtgctgcgcggggatgcg
cggctggtgatcggcacccgcagcgcggtcttcgcgccggtggccgacctcggcctggtc
gtgctgtgggacgacggcgacgactcgctggccgagccacgcgcgccgtacccgcacgcc
cgcgaggtcgcgatgctgcgtgcgcaccaggtgcgctgcgccgcgctgatcggcggatac
gcccgcaccgccgaggcgcaggcgctcgtcgtcagcggctgggcgcacgatctgaccgcg
ccgcgccagacggtgcgggcgcgcgcgccccgcgtcgtcgcgctcgaggacagcgcctac
gcccaggagcgcgatcccgcggcgcggaccgcccggctccccacgatggccctcgacgcg
gcccgcgcggcgctcacccggggcgctcccgtcctggtgcaggtgccccggcgcggttac
gtgccggccctggcgtgcgcgcggtgccgaaccatcgcgcggtgccggcactgcacgggt
ccgctctcgctgcccagccgcgacgcgcccggagcgctctgccggtggtgcggccgggag
gacgccgccctgcgctgcgtccgctgcggctccgacgctgtgcgcgcggtcgtcgtcggt
gcccggcggaccgccgaggaactcggccgggccttccccgggacgacggtgatcacctcc
ggaggggatgccgtggtcgagtcggtgccgcaccggccggcggtcgtggtcgccacaccg
ggcgtcgaaccggtcgccgacgaagggtacggcgcggcgctgctgctcgacagctgggcg
cttctgggccggcaggacctgcgggccgccgaggacaccctgcgccgctggatggcagcg
gcggcgctggtccgctcccgtgccgacggcggcctcgtcgccgtcgtcgcggaatcggcg
atccccacggtgcagcacctcatccggtgggatcccgtcgggcacgccgaggccgagctg
cagtcgcgaaccgaggtcgggctcccgccggccgcgcacatcgccgcggtggacggggcg
ccgctggccgtcgatgcgttgctcgacgcggccgacctgcccccgcaggccgagctgctc
gggcccgtcgacctgccggtgggcgcccgcagacccgccggcatcgcagccgagcatccg
gtgaaccgcatgctcgtgcgggtgccccgcgacgcgggactggccctggctgcggcgctg
cgcaaggccagcgcggtgcagagcgcgcgccacgaccaggagccggttcgcgtacagatc
gaccctctgcacataggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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