KEGG   Mycolicibacterium chubuense: Mycch_4789
Entry
Mycch_4789        CDS       T02150                                 
Name
(GenBank) endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
mcb  Mycolicibacterium chubuense
Pathway
mcb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mycch_4789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcb03400]
    Mycch_4789
Enzymes [BR:mcb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mycch_4789
DNA repair and recombination proteins [BR:mcb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mycch_4789
 Prokaryotic type
     Mycch_4789
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: AFM19485
UniProt: I4BQC8
Position
complement(5029463..5030269)
AA seq 268 aa
MTVSQTRAGEPAAGEPGRRASSKQAGKWDRETHLGLVRRARRMNRTLAQAFPHVYCELDF
TNPLELTVATILSAQSTDKRVNLTTPALFAKYRTARDYAGADRAELEELIRPTGFFRNKS
GSLIKLGQELEERFDGEVPRTLDELVTLPGVGRKTANVILGNAFDIPGITVDTHFGRLVR
RWRWTSEEDPVKVEHAVGELIERSEWTLLSHRVIFHGRRVCHSRKPACGVCVLAKDCPSF
GLGPTDPLVAAPLVRGPETEHLLALAGL
NT seq 807 nt   +upstreamnt  +downstreamnt
gtgaccgtaagtcagacgcgggcaggtgagccggctgccggagaaccgggccgtcgcgcg
tcgagcaagcaggccggcaagtgggacagagagacgcacctgggcctcgtgcgtcgcgcg
cgccggatgaatcgcacgctggcccaagcgtttccccacgtctactgcgagctcgacttc
accaacccgctcgagctcaccgtggccaccatcttgtccgcgcagagcaccgacaagcgg
gtcaacctcaccaccccggcgttgttcgccaagtaccgcaccgcccgcgactacgccggc
gccgaccgggccgagctcgaggagctgatccggcccaccggattcttccggaacaagtcc
ggctcgctgatcaagctggggcaggagcttgaggagcgcttcgacggcgaggttccccgc
acactcgacgagctggtgacgctgccgggcgtcggccgcaagaccgccaacgtgatcctg
ggaaacgccttcgacatccccggcatcaccgtcgacacacacttcggccggctcgttcgc
cgctggcgctggacctccgaagaggatccggtcaaggtcgagcacgccgtcggtgagctc
atcgagcgcagcgagtggacgctgctgagtcaccgcgtcatcttccacggccggcgggtg
tgccactcccgcaagccggcgtgcggcgtctgcgtgctcgccaaggactgcccgtcgttc
ggtctcgggcccaccgacccgctggtcgctgcaccgctggtcagaggcccggagaccgaa
cacctgctggctcttgccggtctctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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