KEGG   Macaca mulatta (rhesus monkey): 707835
Entry
707835            CDS       T01028                                 
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
mcc  Macaca mulatta (rhesus monkey)
Pathway
mcc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    707835 (PNLDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcc03019]
    707835 (PNLDC1)
Enzymes [BR:mcc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     707835 (PNLDC1)
Messenger RNA biogenesis [BR:mcc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     707835 (PNLDC1)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 707835
NCBI-ProteinID: XP_014993114
Ensembl: ENSMMUG00000004181
UniProt: F6X2Q9
Position
4:complement(10778964..10805689)
AA seq 569 aa
MDLGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSAIEGEANKYIAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKAVIDKVTRWLDLAKEGDW
MTLPGIAGFQAFEVQLVLRQALPDIWTVLKDEGVVVKKVSKQHRWYLQNTSCDRESCWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKNVTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHASRCEKYVKTKCPH
EAAYDAFLCGSVLLKVAHLLLQKIHGGCYKYKRSVTHGWEAYFLNKKCASLTLFLVVWLF
MGPCIDPVPESSFPQYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSIRPPILILSIKRWP
GVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDARNVLKEYRGHPTLCISLYRYWRH
SPDVNCVLQVCGIVTAWALLAFIFGRSGP
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggacttgggcgccgacgagttcgaggagagccttcctctgctgcaggagctcgtccag
gaggcggacttcgtgggtctggacatagagttcacgggccttcgatccaacctgtctgga
ccccagcagatcagtctttttgatttgccatcggagtggtacctaaagacccgtcagagc
gttcagcaatttacaatctgtcagattggattgtctgtgttttctgctattgaaggagaa
gcaaacaagtatatagcccattcgtgtaacttttttctcttccccacaacgtttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcagtatggcttc
aactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attcgacacgatatcctgactgggaactggagagtccgcagctctccagataaagaccaa
atcaaggcggtgattgacaaagtgacacggtggctggacctggccaaggaaggtgactgg
atgactcttcctgggatcgctggcttccaggcctttgaggtccaactggtgctgaggcag
gccctccccgacatctggacggtgctgaaagatgagggggtggtagtgaagaaagtgagt
aaacaacatcgctggtatcttcagaacacctcttgtgaccgagagagctgttggaaggaa
aagattcttctctctgcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagaatatccacagcctatttcctgtt
ctcattgacaccaagaatgtaacaaaggatatctggaaggagatgaatttcccgagggtg
tcgaatctttccgaagtctatgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcaagcaggtgtgagaaatacgttaagacaaagtgcccccac
gaagctgcgtatgatgccttcctctgtgggtcagttcttttgaaagtggcacacttgctt
ctacagaagatacatggtggatgttataaatacaaacgttctgtgacacatggatgggaa
gcttatttcttaaataagaaatgtgccagcctcaccctctttcttgtggtttggctgttt
atgggcccctgcatcgaccccgtgcccgagtcgtcctttcctcagtacctcgacgtgctg
gctccttacgtgaaccaagtgaacctcatccgcgcgggggtcccaaagatcaatttttct
ggtccagattatcccagtatccgacctcccatcctcatcctcagcatcaaaaggtggccc
ggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgatgtcagg
cgactcacaagaagccagttcttactcctgaccaataagtttaaggacgcgcggaacgtc
ctgaaggagtaccggggccacccgaccctgtgcatctccctgtaccgctactggaggcac
tccccagacgtcaactgcgtgctccaagtctgtggcatagtgactgcctgggcccttctc
gcgttcatcttcggaagatctggtccctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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