KEGG   Methyloceanibacter caenitepidi: GL4_3003
Entry
GL4_3003          CDS       T03636                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mcg  Methyloceanibacter caenitepidi
Pathway
mcg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GL4_3003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcg03400]
    GL4_3003
Enzymes [BR:mcg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GL4_3003
DNA repair and recombination proteins [BR:mcg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GL4_3003
    RecFOR pathway proteins
     GL4_3003
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 AAA_16 AAA_22 AAA_2 AAA_14 nSTAND3 AAA_18 Rad17 NTPase_1 AAA_17 TsaE RNA_helicase DUF815 AAA_24 AAA_28 NACHT AAA_33 NB-ARC Cytidylate_kin AAA_25 Zeta_toxin
Other DBs
NCBI-ProteinID: BAQ18435
UniProt: A0A0A8K6B7
Position
complement(3037663..3038712)
AA seq 349 aa
MTERVLASAKRDDDQPEAALRPQTLSEFIGQAKVRANLKVFIDAARSRGEALDHVLFAGP
PGLGKTTLAQIVARELGVNFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVE
EILYPAMEDFQLDLIIGEGPAARSVRIDLARFTLVAATTRTGLLTTPLRERFGIPIRLMF
YEVSELQEIVRRGARLLGLPLTEDGAMEVAKRSRGTPRVAARLLRRVRDFAAVQGDGAVD
AALADSALSQLEVDGRGLDALDHRYLRLIAVNYGGGPVGIETIAAGLSEPRDAIEEIIEP
YLLQQGFIARTPRGRVLTGQAFQHLGVAAPPQAAQGMLFTNDENGDEDG
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaccgagcgggtcctggcctcagcaaaacgcgacgacgatcagccggaagccgcgctt
cggccgcagacgctgtccgagttcatcggtcaggccaaggtccgcgccaatctcaaggtc
ttcatcgatgcagcgcgctcgcgaggcgaggcgctggatcatgtgctgttcgcagggccg
cccggcctcggcaagacgacgctggcgcagatcgtggcgcgcgagctcggggtcaatttc
cgggcaacctccggcccagtgatagcgaaggcgggcgatctcgccgcgctcctcaccaat
ctggaagagcgggacgtgctcttcatcgacgagattcatcgcctgagcccggcggtggag
gaaatcctctatcccgccatggaggactttcagctcgatcttattatcggcgaaggaccg
gcggcacggtccgtgcgcatcgacctcgcgcgcttcacgcttgtcgccgccaccacgcgc
accgggcttttgacgacgcccttgcgcgagcgcttcggcattcccatccggctcatgttc
tacgaggtgagcgagctgcaggagatcgtgcgccggggcgcccggctcttgggactgccg
ctgacggaagacggcgccatggaggtcgcgaagcgatcgcggggcacgccgcgcgtggcg
gcgcgtctgttgcgccgggtgcgcgatttcgcagccgtgcaaggcgacggggccgtggac
gcggcgctggcggacagcgcgctgtcgcagcttgaagtggacggtcgcgggctcgatgcg
ctggatcaccgctacttgcgcctgatcgccgtgaactacggcggcggtcccgtcgggatc
gagaccatcgccgcagggctgtcggagccgcgcgacgccatcgaggaaatcattgagccg
tatctgctgcagcagggcttcatcgcgcgcacgccgcgcggccgggtgctgacggggcag
gccttccagcatcttggcgtcgccgcgccgccgcaggccgcacaaggcatgctcttcacg
aacgacgaaaacggggacgaagacggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (40)   

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