KEGG   Momordica charantia (bitter melon): 111011242
Entry
111011242         CDS       T05045                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03013  Nucleocytoplasmic transport
mcha03015  mRNA surveillance pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111011242
  09122 Translation
   03013 Nucleocytoplasmic transport
    111011242
   03015 mRNA surveillance pathway
    111011242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111011242
   03041 Spliceosome [BR:mcha03041]
    111011242
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     111011242
Spliceosome [BR:mcha03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    111011242
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 111011242
NCBI-ProteinID: XP_022140633
UniProt: A0A6J1CIF4
Position
Unknown
AA seq 250 aa
MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGG
GHGHGHRHGRDYHRKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDE
EDDDDRKQRR
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcttcgttgttcaaggacccgacaaagctatctgtatatcgggatagaagatttcag
ggaacccaagatgaatttgaaattgcacttcagacttcaatcaccgtttatgtgggaaat
atgtccttttatacaacagaagagcaagtatatgagcttttttctcgagctggagaaatt
aagaagataatcatgggtttggataagaatacgaaaacaccctgtggcttttgttttgtc
ctatactattctcgggaagatgcagaggatgctgtgaaatatatgagtggaacaattctt
gatgatcgtcctatccgtgtggattttgattgggggtttcaggatggcaggcaatggggt
cgtggtcgaagtggtggtcaggtgcgtgatgaatatcgaacagactacgatcctggcaga
ggtggctatggaaagttggtccagaaagagttagaagcacagaggcagcttgtggattat
ggtaccggttcactgggctctgtgccgccagtgatacctcagtatggaaaacacggtgga
ggccatggacatgggcatcggcatggtagagattaccatcgtaagcgctaccgagatgat
gatcaccatgcccatgaaagctctaagagaacgtcagattatgaatctaggaggaaccct
gatcatgaatccagaccggagaagaatccgaggtttcgggagagtggcgattctgatgaa
gaagatgacgatgaccgaaagcagcggcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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