KEGG   Momordica charantia (bitter melon): 111016637
Entry
111016637         CDS       T05045                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03020  RNA polymerase
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111016637
  09124 Replication and repair
   03420 Nucleotide excision repair
    111016637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcha03021]
    111016637
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111016637
Transcription machinery [BR:mcha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     111016637
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111016637
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 111016637
NCBI-ProteinID: XP_022147788
UniProt: A0A6J1D221
Position
Unknown
AA seq 320 aa
MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLISSDHTVVPVDFADSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK
WSPAATVTFMYEPSIHINEDLMETLTLEERKTWVESCPTRVFEVDPNTHQVVVVDPEAYT
YDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
DDTVEADDQFGELGAHMRGG
NT seq 963 nt   +upstreamnt  +downstreamnt
atggaaggggcatcgtaccagcgcttcccgaaggtgaagatccgagagctcagagatgac
tacgccaagttcgagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtc
atgatcgccgaggttcccaccatcgccattgaccttgttgaaatcgaagtgaactcctcc
gttctcaacgacgagttcatcgcccaccgcctcggtctcattcccctcaccagcgagcgt
gctatgtccatgcgcttctctcgcgactgtgatgcttgtgatggcgatggccagtgcgag
ttttgctctgtcgagtttcaccttcgcgccaagtgccactccgaccaaaccctagacgtc
accagcaaggatctcattagttctgatcacactgttgtgcctgttgatttcgctgattct
gctgctgctagtggtgaagtgctcgataccaaaggaataatcattgtgaagctacggcgc
ggtcaagaactgaggttgagagccatagccaggaagggcattggtaaggatcatgcaaaa
tggtctcctgcagcaactgtgaccttcatgtatgagccaagcattcacatcaatgaagac
ctaatggaaacgttaacactagaggaaaggaaaacctgggttgaaagttgcccaaccaga
gtatttgaagttgatcctaatacccaccaggttgtggtggttgatcctgaggcttacact
tacgatgatgaggtgattaagaaagcagaagctatgggtaaagctggacttgtggatatc
actgccaaagaagatagttttatcttcacagttgaatctaccggtgcaatcaaagcttct
caattgatacttaatgccatagatattctgaaacagaagctggatgcagtccgcctttca
gatgatactgtagaagcagacgaccagtttggtgagttaggtgcacatatgcgaggtgga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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