KEGG   Momordica charantia (bitter melon): 111021793
Entry
111021793         CDS       T05045                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03030  DNA replication
mcha03410  Base excision repair
mcha03420  Nucleotide excision repair
mcha03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111021793
   03410 Base excision repair
    111021793
   03420 Nucleotide excision repair
    111021793
   03430 Mismatch repair
    111021793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcha03032]
    111021793
   03036 Chromosome and associated proteins [BR:mcha03036]
    111021793
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111021793
DNA replication proteins [BR:mcha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111021793
  DNA Replication Termination Factors
   ELG1-RFC complex
    111021793
Chromosome and associated proteins [BR:mcha03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111021793
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111021793
  Check point factors
   HRAD17(Rad24)-RFC complex
    111021793
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 DNA_pol3_delta Sigma54_activ_2 DUF815 AAA_5 RuvB_N RsgA_GTPase AAA_22 ABC_tran AAA_29 AAA_23 AAA_16 AAA_2 Mg_chelatase TsaE nSTAND3 T2SSE nSTAND1 FtsK_SpoIIIE RNA_helicase ATPase_2 AAA_11
Other DBs
NCBI-GeneID: 111021793
NCBI-ProteinID: XP_022154548
UniProt: A0A6J1DMG0
Position
Unknown
AA seq 354 aa
MLWVDKYRPKTLDQVTVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
ASAEKVKVENKTWKVDAGTRTIDIELTTLSSTNHVELTPSDAGFQDRYIVQDIIKEMAKN
RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
CLNVRINGPTEEQIVKVLELIGKKEGLQLPPGFASRIAEKSNRSLRRAILSFETCRVQQY
PFASNQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELQHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaagtatcgtcccaaaaccctagaccaggtcacagttcaccaggac
gtggcgcagaatctgaagaaattggttaccgagcaggactgccctcatttgctcttctat
ggcccctccggttccgggaagaaaaccctagtcatggctcttattcgacagatgttcggt
gccagtgcggagaaggtgaaggtggagaataaaacgtggaaagttgatgctggaaccaga
actattgatatcgagttgaccacgttatcgagcacaaaccatgtggagctcactcccagt
gatgcaggttttcaagataggtacatcgttcaagatataatcaaagagatggcgaaaaac
agaccaattgactccaaagggaaaaggggacataaagttttggttctaaacgacgttgac
aaactatcaagagaagcccagcactctctcaggagaacaatggagaaatatagctcgtac
tgcaggttaatactttgctgcaatagttcatcaagagttactgaagcaatccgttctcgc
tgcctaaatgtgcggataaatggaccaacggaggagcagatcgtcaaagtactagagttg
attgggaagaaagaaggactgcagcttccacctggatttgcttctcgtattgcagaaaaa
tcaaaccggagtttgaggagagctattctatcatttgagacttgtcgtgttcagcagtat
ccttttgctagtaaccaggcaataccaccaatggattgggaggagtacatctctgagata
gcatcagacataatgaaggagcaaagccctaagagactgttccaggttcgtgggaagtta
tacgagctacttgttaattgtattccaccagagattatattgaagagactgctttatgag
ctacttaagaagttggatgccgaattacagcatgaggtctgccattgggctgcatattat
gaacataggatgcgccttggacagaaagccatcttccatattgaagcttttgtggcgaag
ttcatgagcatatacaagaatttcctcatctcggcgttcggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (24)   
   Pfam (24)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system