KEGG T01401: Mesci

Mesorhizobium ciceri: Mesci_3891

Entry

Mesci_3891 CDS T01401

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mci Mesorhizobium ciceri

Pathway

mci03410	Base excision repair
mci03420	Nucleotide excision repair
mci03430	Mismatch repair
mci03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mci03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mci03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mci03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mci03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme SAM_PNT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4026029..4026889)

AA seq 286 aa
MRLKFIEPLMPTLVDRPPEGGDWIHEVKFDGYRSQMIIDEGGARIFTRRGLDWSSKYRDL
AAAAALLNVENAIIDGEIIVLNAAGLSDFAELRKAITRRQHDLYFVAFDLLHLNGHDLCD
MALEDRREILEGMIPPDIRIQFSQALPGEASAVYHLVDQAGLEGMVSKRRDSKYRSGPST
SWLKVKCFAVGEFDLLGVEREAGKPAFALMAERGTGRYVGSAFITLNRELRERLWKRVQE
HAGPPPQGIKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREEP

NT seq 861 nt +upstreamnt +downstreamnt
atgcgtttgaagttcattgagcccctgatgccgaccttggtcgataggccacccgagggc
ggggactggattcatgaagtcaaattcgacggctaccgctcgcagatgatcatcgacgag
ggaggcgcacgtattttcacccggcgcggactcgactggtcatcgaaatatcgtgatctg
gcggcggcggcggcattgctcaatgtcgaaaacgccatcattgacggcgagatcatcgtt
ttgaatgccgccggactttccgatttcgcagagctgcgcaaggctatcactcgccggcag
cacgacctctattttgttgcattcgatcttctgcatctcaacggccacgacctgtgcgat
atggcgctggaggaccggcgcgaaatcttggagggtatgatcccgcccgacatacgcatc
cagttcagccaagcgctaccgggggaggcgagtgcagtctatcaccttgtcgaccaagcc
ggacttgaaggcatggtgtcgaaacgtcgggacagtaaatatcgcagcggaccgtcgacc
agctggctgaaagtcaagtgctttgcagttggcgagttcgacctactcggagtcgagcgt
gaggcaggcaagccggccttcgcgctgatggctgaacgcggcacaggtcggtacgtcggt
tcggcgttcatcaccttgaatcgggaattgcgcgagagactctggaaacgcgttcaggag
cacgcagggccgccaccgcagggcatcaagcggccggcgacgcaatgggtcaagccggga
ctgatcggccgtgtgaagcacctgcggggcgaggaagaccttcgacatgcctcgctacag
gacttccgggaagaaccatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MCI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system