KEGG T01401: Mesci

Mesorhizobium ciceri: Mesci_5469

Entry

Mesci_5469 CDS T01401

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mci Mesorhizobium ciceri

Pathway

mci03410	Base excision repair
mci03420	Nucleotide excision repair
mci03430	Mismatch repair
mci03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mci03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mci03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mci03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mci03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

5653354..5654364

AA seq 336 aa
MHEPTNAFPLPLDTSPMEARLADAIPRDGNRWQYEPKWDGFRCLAFKSDDTVDLRAKSGK
PLGRYFPEITEILRDLKRGHFVIDGEIVIEVDGELSFEALQMRLHPAQSRIRKLSSQTPA
SLILFDMLARPGGEVITGKPLVERRRAIEDFVTSSNSPDLRLSKCTYDAATAARWLNGAG
HASTDGIVAKVLDEHYLCGERAMVKVKPRRTADCVVGGFRYLAGSREVGSLLLGLYNDDG
KLDHVGFTSTIARTDRGALTRRLEGLRSEPGFTGKAPGGPSRWSTERSGQWEPLEPELVV
EVRFDHVTGNRFRHGTKLLRWRPDKAPRQCTFEQIE

NT seq 1011 nt +upstreamnt +downstreamnt
gtgcatgaaccgacaaacgccttcccgctcccgctggatacgtctccgatggaggccagg
cttgccgatgcaatcccaagggatgggaaccgctggcagtacgagcctaaatgggacgga
ttccgctgccttgctttcaagagcgacgacaccgttgacctgcgcgccaaatccggcaag
ccgctcggccgctattttccggaaatcacggagatcctgcgtgacctcaagcgcgggcat
ttcgtcatcgacggcgagattgtcatcgaggtggacggtgagctttccttcgaggcgctg
cagatgcgtcttcacccggcacaaagcagaatccgcaaactgagttcgcagacgcctgcc
agtctgatcctcttcgacatgcttgccaggccgggcggcgaggtcatcacgggcaaacca
cttgtcgaaaggcggcgagcgatcgaggacttcgtgacctcctcgaacagtccggatctt
cgcctgtcgaagtgcacttatgatgcagcgacggcggctcgatggctgaacggggccggc
catgcatcgaccgacggcatcgtggccaaagtgctcgacgagcactatctgtgcggcgaa
cgtgcgatggtgaaggtaaagccgaggcgcaccgccgattgcgttgtcggcggtttccgc
tatctcgcgggtagccgtgaggtcggctcactgctcctcggcctctacaatgacgacggc
aagctcgatcacgtcggcttcacgtcgaccatcgccaggaccgacagaggagcgctcacg
cgccggctggaagggctgcggtcagagcccggattcactggcaaggcgcccggcggcccg
agccgctggagcacggagcgcagcggacaatgggagcctttggaacctgaactggtggtg
gaggtccgcttcgaccacgtcaccggcaatcggtttcgccatggcaccaaactgctgcgc
tggcgccccgacaaggcgccacggcaatgcacgttcgagcagatcgaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MCI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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