KEGG T03651: MCAL160

Mycoplasmopsis californica HAZ160_1: MCAL160_0422

Entry

MCAL160_0422      CDS       T03651

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mcm Mycoplasmopsis californica HAZ160_1

Brite

KEGG Orthology (KO) [BR:mcm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcm03032]
    MCAL160_0422 (topA)
   03400 DNA repair and recombination proteins [BR:mcm03400]
    MCAL160_0422 (topA)
Enzymes [BR:mcm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MCAL160_0422 (topA)
DNA replication proteins [BR:mcm03032]
Prokaryotic type
  DNA Topoisomerases
   MCAL160_0422 (topA)
DNA repair and recombination proteins [BR:mcm03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MCAL160_0422 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim zf-C4_Topoisom Toprim_4

Other DBs

NCBI-ProteinID:

BAP01011

Position

317273..319099

AA seq 608 aa
MSKLVIVESPNKVATIQKYLGKEYEVVASVGHITKLSTKNSGASIKMGINVEEWEPVYVL
DPVKRTTVKKLKDKAAKAEEVLIATDPDREGEAIGDHLVKFLKCEQNYSRVKYNEITKEA
ILNAVAKSGKLDQALIDAQKARRMLDRIIGFKLSNLIKQKLSNSPTNPSAGRVQSIALKL
IVDREAEIEAFIPRDYHKAIALINQNVKAIYFNEKNTAEEREWIYPHEKDFIENALNLTP
KSLVVSDIKETKKRLGAITPLKQSALYKKSPFSSASTQAAAQRLYEGYGDGGLISYPRTD
STRLSQYFIDNARKFIIDQFGAEYVSKELKGFSGDQDAHEAIRPTDISLNPEIAREKFNL
NNYDYKIYKLIYEHTLQALITPPLRASKAYTFVKGDLKFKYSASKILFPGYYVVKDDKED
AFDPGYELGQIVNVEEFVISDHQTQPPARYSEGSLIEALDNIKVGRPSTFASTVKIVLER
LYAENQNGSLHPTDFGKIVMHKLIDSFPDIIEEGYTALVEEELDMIAQSKVSLKPVMQSF
WDKFNQVYTRAEATMEHTQIAHDYLNEICEKDGGDLVIRTNKANGNKFVGCKNFPKCRYT
RNLDAKTN

NT seq 1827 nt +upstreamnt +downstreamnt
atgagcaaattagtaatcgtggagtcgcctaataaagtggcgactattcaaaagtattta
ggaaaagagtatgaagtggtggcatctgttggtcatatcacaaaactttccactaaaaat
tcaggcgcttcaattaaaatgggtataaatgttgaagaatgagaacctgtatatgtttta
gaccctgtcaaaagaacaacggttaaaaaactaaaagataaagctgcaaaagctgaggaa
gttttaattgcaaccgaccctgaccgcgagggcgaggctattggcgatcatttagttaaa
tttttaaaatgtgagcaaaattactcacgtgttaagtataatgaaataaccaaagaggca
atccttaatgcggttgctaagtcaggaaagttagatcaagcactaattgatgcccaaaaa
gctcgtagaatgctggatagaataattggttttaaattaagtaatttgatcaagcaaaag
ctttcaaattcaccaactaatccatctgctggacgtgttcaatcaattgctttaaaatta
attgttgaccgcgaagcggaaatcgaagcttttattcctcgcgattatcataaagctata
gcgctaattaatcaaaatgtcaaagcaatatattttaatgagaaaaataccgctgaggaa
agagagtgaatttatccccacgagaaagattttattgaaaatgcactgaatttaacacca
aaatcgttggttgtaagtgatattaaagaaactaaaaaaagattaggggcaattacaccg
cttaaacaatcggcattgtacaaaaaatcaccattttcatcagcaagcacgcaagcagct
gcccaaagactttatgaagggtatggagacggcggtcttattagttatccacgtacagat
tcaacgcgtttaagccagtattttattgataatgcacgtaaatttatcattgatcaattt
ggggcggaatatgtttccaaagagttaaaaggcttttctggcgatcaagatgctcacgaa
gctattagaccaactgatataagcttaaaccctgaaattgcgcgcgaaaaatttaattta
aataattacgattataaaatttacaaacttatttatgaacatacattgcaggcgttgatt
acaccaccattaagagcaagcaaagcttatacttttgttaaaggtgatttgaaatttaaa
tattctgcttcaaaaattcttttccctggttactatgtggtaaaagatgataaagaagac
gcttttgatcctggttatgaattagggcaaattgttaatgttgaagaatttgtgattagc
gaccatcaaacgcaacctcccgctcgttatagtgaaggttcattaattgaagccttagac
aacattaaggttggccgtccttcaacatttgcttcaacggttaaaatagttctggaaaga
ttgtatgccgagaatcaaaatggctctcttcatccaacagattttggcaaaattgttatg
cacaaacttattgattcatttcctgacataattgaagaaggttacacggcactcgttgaa
gaagaattggatatgattgcccaaagtaaagtttcattaaaaccagtgatgcaaagcttt
tgagataaatttaatcaagtttacacacgtgctgaagcaacaatggaacacacacaaata
gctcacgattatttaaacgaaatctgtgaaaaagatggtggcgatttagttattagaacc
aataaggcaaacggtaataaatttgttggttgcaaaaacttcccaaaatgccgttacaca
agaaacctagatgcaaaaactaattaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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