KEGG T02421: BN42

Mycobacterium canettii CIPT 140070010: BN42_41358

Entry

BN42_41358        CDS       T02421

Name

(GenBank) Pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

mcx Mycobacterium canettii CIPT 140070010

Brite

KEGG Orthology (KO) [BR:mcx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcx03009]
    BN42_41358
   03016 Transfer RNA biogenesis [BR:mcx03016]
    BN42_41358
Enzymes [BR:mcx01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     BN42_41358
    5.4.99.29  23S rRNA pseudouridine746 synthase
     BN42_41358
Ribosome biogenesis [BR:mcx03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN42_41358
Transfer RNA biogenesis [BR:mcx03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    BN42_41358

SSDB

Motif

Pfam:

PseudoU_synth_2 DUF3659

Other DBs

NCBI-ProteinID:

CCK61427

Position

complement(3827816..3828733)

AA seq 305 aa
MALRPEDRLLSVHDVLGPVRVRLLGGSVLAELAARFGVAGRAKVLAGEVVDDDGAVVDSG
TVLPPGSVVHLYRDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRL
RRELGLPELSPAHRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLAL
PRLVRSRIVKRRGHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGI
PIIGDPLYPNVISVAAHDFSTPLQLLAQRIEFDDPLTGSHRAFASTRTLTGATLPTWSAA
ADSRP

NT seq 918 nt +upstreamnt +downstreamnt
gtggcgttgcggccagaggatcgtttgcttagcgtgcacgacgtgctggggccggtgcgg
gtgcgactgcttggcgggtcggtgttagccgagctggccgcacggtttggcgtggcgggc
cgtgcgaaggtgctggccggggaggtggtcgacgacgacggtgcggtggtcgacagcggc
acggtgctgccgcccggttcggttgtgcacctgtatcgcgacctgcccgacgaggtgccg
gtgcccttcgatgtcccagtgctgcatcaagacgccgacatcgtcgtcgtcgacaagcca
catttcttggcgaccatgcctcgggggcgacacgtcgcgcagaccgcgctggtgcggctg
cgtcgtgaactgggattgcccgagctgagcccggcccaccggctggaccggctgaccgcc
ggggtgttgttgttcaccacccgacgcgaggtgcgcggcagctaccagacgatgttcgcc
cgcggtttggtgcgcaagacctatctggctcgcgcacccgttgccccgggtctggccctg
ccgcgcctggtccgcagtcgcatcgtcaagcgccggggccatctgcaggcggtctgtgag
cccggcgttcccaacgccgagacgctggtggagcggatagcgcgcgacggtctgtatcgg
ctgacaccgaccaccgggcgcacccaccagctgcgagtgcacatggcggcgctggggata
ccgatcatcggtgacccgttgtaccccaacgtgatatccgtggccgcccacgacttcagc
acaccgctgcagttgctcgcgcagcgcatcgagttcgacgatccgctgaccgggtcgcac
cgcgcgttcgccagcacgcgcacgttgaccggtgctacgttgccaacatggtcagccgcg
gccgattcccggccgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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