KEGG   Methylobacterium extorquens DM4: METDI0009Help
Entry
METDI0009         CDS       T00947                                 

Gene name
recD
Definition
Helicase (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mdi  Methylobacterium extorquens DM4
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdi00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    METDI0009 (recD)
Enzymes [BR:mdi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     METDI0009 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
8968..11169
Genome map
AA seq 733 aa AA seqDB search
MNTSVRPGDLDGSTPLDMLAGSVERVTFHSAETGFCVLKVHARGRRDLVPVVGHAPAIAA
GEWLTASGRWVTDREHGLQFRADTLQVTPPTGIEGIERYLASGQMRGIGPMMAKRIVARF
GEAVFEIIEAEPARLTEVEGIGRKRAARIVKGWAEQKAVREIMIFLHAHGVGTARATRIF
RTYGGDSLKVMAEDPYRLARDIRGIGFRTADAIALRLGLARDAPQRLAAGVSYALQTAMD
EGHCGLPVERLVRLAAELLDVAPDLIRLAAALVLREGREVVADTLRGEPCLFLKGLHGAE
RVIAMQLAERAAGPPPWAAIDFALARPWVEAKTGKTLSASQAEAVGLVLRSKLCVLTGGP
GVGKTSTLDAILRILTAKGVRVLLAAPTGRAAKRMAEQTGLDARTLHRLLEIDPRNGGFQ
RNEDNPLDCDLLVIDETSMVDVPLMHALLKAVPERAGLILVGDVDQLPSVGPGQVLADVI
ASGTVPVARLTEIFRQAAQSRIVVNAHNINTGRMPAAPAKGEDSDFYLVEIEDADEGVET
LIELVTRRIPRRFGLNPTRDIQVLTPMIRGSLGSRNLNNALQRVLNPSPSAEVERFGWRF
APGDRVMETRNDYDRDVFNGDLGTISAIDAEDEALVVDFDGRAVIYPFNELDTLVPAFAT
TIHKAQGSEYPAVVIPVVTQHRTMLARNLLYTGVTRGRRLVVLIGQRRALAMAVREGASR
RRWTKLREWLDAA
NT seq 2202 nt NT seq  +upstreamnt  +downstreamnt
atgaacacctcagtccgtcccggcgacctcgatggcagtacgcccctcgacatgctcgcc
ggctcggtcgagcgggtgacgttccacagcgccgagaccggcttctgcgtcctcaaggtc
catgcccgcggccggcgcgacctcgtaccggtggtgggtcacgcgcccgccatcgccgcg
ggcgagtggctgaccgcttccgggcgatgggtcaccgaccgtgagcacggcctccagttc
cgcgccgacacgcttcaggtgacaccgccgaccgggatcgagggcatcgagcgctacctc
gcctccgggcagatgcgcggcatcggcccgatgatggccaagcgcatcgtcgcccgcttc
ggggaggcggtgttcgagatcatcgaggccgagcccgcccgcctcaccgaggtcgagggg
atcggccgcaagcgcgccgcgcgcatcgtcaagggctgggccgagcagaaggccgtgcgg
gagatcatgatcttcctgcacgcccacggcgtcggcaccgcacgggcgacccggatcttc
cgcacctatggcggggattccttgaaggtcatggccgaggacccctatcggctcgcccgc
gacatccgcggcatcggcttccgcacggcggacgccattgccctgcgcctcggcctcgcc
cgcgacgcgccgcagcggctcgctgccggtgtctcctacgcgctccagacggcgatggat
gagggccattgcggcctgcccgtcgagcggctggtgcgtctcgccgccgagcttctcgac
gtcgcgcccgatctcatccggctcgccgcggcgctcgtcctgcgcgagggccgggaggtc
gtcgcggatacgctgcgcggcgagccctgcctgttcctcaagggcctgcacggcgccgag
cgcgtcatcgcgatgcagctggccgagcgcgccgccggcccgccaccctgggccgcgatc
gacttcgcgctggccaggccctgggtcgaggcgaagaccggaaagacgctgtccgcctcg
caggccgaggcggtcgggctggtgctccgctcgaagctctgcgttctcaccggcggcccc
ggcgtcggcaagaccagcaccctcgatgcgatcctgcgcatcctcaccgccaagggcgtg
cgggtgctgctcgccgcccccaccggccgcgcggccaagcgcatggccgagcagaccggg
ctggacgcacgcaccctccaccgcctgctggagatcgacccgcgcaacggcggctttcag
cgcaacgaggacaacccgctcgattgcgatctcctcgtcatcgacgagacctcgatggtc
gacgtgccgctgatgcatgcactgctcaaggcggtgccggagcgggcgggcctgatcctc
gtcggcgatgtcgatcagcttccgtcggtcggacccggacaggtgctggccgacgtgatt
gcctccggaaccgtgccggtggcgcgcctcaccgagatttttcgccaagcggcgcagagc
cggatcgtcgtcaatgcccacaacatcaacaccgggcggatgccggccgcgcccgccaag
ggcgaggacagcgacttctacctcgtcgagatcgaggacgcggacgagggcgtggagacg
ctgatcgaactcgtcacccgccgcatcccacgccgcttcggtcttaatcccacccgcgac
atccaagtgctgacgccgatgatccgcggctcgctcggcagccgcaacctcaacaacgcc
cttcagcgcgtcttgaatccgtcgccctcggcggaggtcgaacgcttcggctggcgcttt
gcgcccggcgaccgggtgatggagacccgcaacgactacgaccgcgacgtgttcaacggc
gacctcggcacgatcagcgccatcgatgcggaggacgaagcgctcgtggtcgatttcgac
ggtcgtgcggtgatctaccccttcaacgaactcgacacgctggtgccggccttcgccacg
acgatccacaaggcacagggctcggaatatccggccgtggtgatcccggtggtgacccag
caccgcacgatgctggcgcgcaacctgctctataccggcgtcacccgcgggcgccgcctc
gtcgtgctgatcggccagcgccgggcccttgcgatggcggtccgcgaaggcgcctcgcgg
cggcgctggaccaagctgcgggagtggctggacgccgcctga

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