KEGG   Methylobacterium extorquens DM4: METDI0054Help
Entry
METDI0054         CDS       T00947                                 

Gene name
trpB
Definition
tryptophan synthase, beta protein (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
mdi  Methylobacterium extorquens DM4
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:mdi00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    METDI0054 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    METDI0054 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    METDI0054 (trpB)
Enzymes [BR:mdi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     METDI0054 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(53123..54364)
Genome map
AA seq 413 aa AA seqDB search
MTLNPAPNSFRTGPDERGRFGIFGGRFVAETLMPLILDLEKAYADAKADPSFKADMESYG
THYIGRPSPLYYAERLTEHLRAQAPAGQGAKIFFKREELNHTGSHKVNNVLGQILLARRM
GKPRIIAETGAGQHGVATATLCARFGLKCVVYMGAVDVERQAPNVFRMKMLGAEVIPVQS
GTRTLKDAMNEALRDWVTNVSDTFYCIGTVAGPHPYPAMVRDFQSVIGIETKQQMLEMEG
RLPDSLIACIGGGSNAMGLFHPFLDDRDVEIYGVEAAGHGVQSGLHAASLTGGRPGVLHG
NRTYLLMNEDGQIADAHSISAGLDYPGIGPEHAWLHEMGRVTYLSATDAETLEAFKLCSM
LEGIIPALEPAHALSKVMELAPTKPAEHLMVLNLSGRGDKDIPQVAQIFGQTL
NT seq 1242 nt NT seq  +upstreamnt  +downstreamnt
gtgacgctgaaccccgctcccaattccttccgcaccgggccggacgagcgcggtcgcttc
ggcatcttcggcggccgcttcgtggccgagacgctgatgccgctgattctcgatctcgag
aaggcctacgccgacgccaaggccgacccgtcgttcaaggcggatatggaatcctacggc
acccactacatcggccggccgagcccgctctactatgccgagcgcctgaccgagcacctg
cgcgcccaggctccggcggggcagggggcgaagatcttcttcaagcgcgaggagctgaac
cacaccggctcgcacaaggtgaacaacgtcctcggccagatcctgctcgcccgccgcatg
ggcaagccgcggatcatcgccgagaccggcgcgggccagcacggcgtcgcgaccgcgacg
ctctgcgcccgtttcggcctgaaatgcgtggtctacatgggcgccgtcgatgtcgagcgg
caggccccgaacgtgttccgcatgaagatgctcggcgccgaggtgatcccggtgcaatcc
ggcacgcgcacgctcaaggacgcgatgaacgaggcgctgcgcgactgggtcaccaacgtc
tcggacaccttctactgcatcggcaccgtggccggcccccatccctatccggcgatggtg
cgcgatttccaatcggtgatcggcatcgagacgaagcagcagatgctggagatggagggc
cgcctgccggattcgctcatcgcctgcatcggcggcggctcgaacgccatgggtctgttc
caccccttcctcgatgaccgcgacgtcgaaatctacggcgtcgaggcagccgggcacggc
gtgcagagcggcctccacgccgcctcgctcacgggcggccgcccgggcgtgctgcacggc
aaccggacctacctgctgatgaacgaggacggccagatcgccgacgcccactcgatctcg
gcgggcctcgattatcccgggatcggccccgaacacgcatggctgcacgagatgggccgg
gtcacctacctgtcggcgaccgatgccgagacgctggaggcgttcaagctctgctcgatg
ctagagggcatcatcccggctctggagcccgcgcacgcgctgtcgaaggtgatggagctc
gcgccgaccaagccggcggagcacctgatggtgctgaacctctctggccgcggcgacaag
gacatcccgcaggtggcgcagatcttcggtcagacgctctga

DBGET integrated database retrieval system