KEGG   Methylorubrum extorquens DM4: METDI1484
Entry
METDI1484         CDS       T00947                                 
Symbol
priA
Name
(GenBank) Primosome factor N' (replication factor Y)
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    METDI1484 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdi03400]
    METDI1484 (priA)
Enzymes [BR:mdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     METDI1484 (priA)
DNA repair and recombination proteins [BR:mdi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     METDI1484 (priA)
SSDB
Motif
Pfam: DEAD PriA_3primeBD PriA_C ResIII PriA_CRR Helicase_C zf-CHY AAA_19 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: CAX23086
UniProt: C7CG10
Position
1344836..1347013
AA seq 725 aa
MPAVAEILIPLALDTAYSYAVPAGLTLAEGDIVQVPLGPRETIGVVWGLDERASGGNLRP
VTGKIEAPPLSESLRKLVDWLARYTLAPKGSALAMALRLPDEAARNEAPRVGVRAAGKPP
TRQTVARGKVMAVAADNAVRGKSALAKEAGVSLSVVDGLIDDGALETVALMPEPVALPPD
PDHPRVPLSDAQAEAAHALIANAPSPTDAATGETILLEGVTGSGKTEVYFEAVAECVRQG
RQALVLMPEIALTAQFLDRFAGRFGVRPATWHSGIGGKRRERLRAGVAAGEVSVVVGARS
ALFLPFRNLGLIVVDEEHESAYKQEDGVHYHARDMAVVRGKIEGCPVVLASATPSIESRV
NAQSGRYRHVVLPGRFGGRPMPDIAAIDMRLDKPERGRFLSPPMVNAVKSTLAAGDQALL
FLNRRGYAPLTLCRACGHRYQCRNCSTWLVEHRFRRALVCHQCGYAERKPEACTECGAFD
HLTPCGPGVERIAEEVTELFPEQRIVVLSSDFPGGAERLRQELETVAAGDCDIVVGTQLV
AKGHNFPHLTLVGVLDADIGLTSGDPRAAERTFQLLQQVTGRAGRGERPGRALVQTYQPE
HPVIAALLSGDADRFYEEEIWAREAAGLPPFGRLAALIVSGEEREKAEAHGQALARVAEP
PPGVSVLGPAEAPLALIRGRWRFRLLVKTERGIDVQSYLRDWLARGPKPRGNLKVAIDVD
PQSFL
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgcctgccgtcgccgaaatcctgatcccgctcgcgctcgacaccgcctacagctacgcg
gtgccggccgggctgaccctcgccgagggcgacatcgtgcaggtgccgttgggtccgcgc
gagacgatcggcgtggtctgggggctcgacgagcgggcctcggggggaaacctgcggccg
gtgacgggcaagatcgaggcgccgccgctctcggagtctttgcgcaagctggtcgattgg
ctcgcgcgctacaccctggcgccgaagggttcggcgctcgccatggccctgcgcctgccc
gacgaagccgcccgcaacgaggcgccgcgggtcggtgtgcgcgccgccggcaagccgccg
acccggcagacggtcgcccgcggcaaggtgatggctgtcgccgccgacaacgcggtacgg
ggcaagagcgcgctcgccaaggaggccggggtctcgctcagcgtggtcgatggactgatc
gatgacggcgcgctggagaccgtggcgctgatgcccgagcccgtggcgctgccgccggac
ccggaccatccgcgggtgccgctgtccgacgcgcaggcggaggcggcgcacgcgttgatc
gcgaacgccccttcccccaccgatgctgcgaccggtgagacgatcctcctcgaaggcgtc
accggctcgggcaagaccgaggtctatttcgaggcggtggccgagtgcgtgcggcagggg
cggcaggccctggtgctgatgccggaaatcgcgctgacggcgcagtttctcgaccggttc
gccgggcgcttcggggtgcggccggcgacctggcattccggaatcggcggcaagcgccgc
gagcggctgcgggcgggtgtggccgcgggcgaagtctcggtggtggtcggcgcccgctcg
gccctgttcctgccgttccggaatctcggcctgatcgtcgtcgatgaggagcacgaatcc
gcctacaagcaggaggatggcgtccactatcacgcccgcgacatggcggtggtacgcggc
aagatcgagggctgcccggtggtgctcgcctcggccacgccgtcgatcgagtcgcgggtc
aacgcgcagagcgggcgctaccgccacgtcgtgctccctggccgcttcggcgggcggccg
atgcccgacatcgcggccatcgacatgcgcctcgacaagccggagcgcgggcgcttcctg
tcgccgccgatggtgaacgcggtcaagagtacgctggccgcgggtgatcaggcgctgctg
ttcctcaaccgccggggctacgcgccgctcaccctgtgccgggcctgcggccaccgctat
cagtgccgcaactgctcgacctggctcgtggagcaccgcttccgccgcgcgctggtctgc
caccaatgcggctacgctgagcgcaagccggaggcctgcaccgagtgcggcgccttcgat
cacctcacgccctgcgggccgggcgtcgagcggatcgccgaggaggtgaccgagctgttc
cccgaacagcgcatcgtcgtgctgtcgagcgactttcccggcggcgccgagcggctgcgc
caggaactggagacggtggcggcgggcgattgcgacatcgtcgtcggcacgcagctcgtg
gccaagggccacaacttcccgcacctgaccctcgtcggggtgctcgacgccgatatcggc
ctcacctccggcgatccgcgcgcggccgagcgcaccttccagctcctgcagcaggtgacg
gggcgtgcggggcgcggcgagcggccgggtcgggccctggtgcagacctaccagcccgag
catccggtcatcgccgccctgctctcgggggatgccgaccgcttctacgaggaagagatc
tgggcccgcgaggccgcggggcttccgccgttcggacggctcgcggcgctgatcgtctcc
ggggaagagcgggagaaggccgaggcgcacggtcaggcgcttgcacgcgtcgccgagccg
ccgcccggcgtctccgtcctcggcccggcggaggcgccgcttgccctgatccgcgggcgc
tggcgattccggctgctggtgaagaccgagcgcggcatcgacgtgcagagttatctgcgg
gattggctggcgcgcggaccgaagccgcggggtaacctcaaggtcgcaatcgacgtggac
ccgcagagcttcctataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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