KEGG   Methylorubrum extorquens DM4: METDI3461
Entry
METDI3461         CDS       T00947                                 
Symbol
nusA
Name
(GenBank) transcription termination/antitermination L factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
mdi  Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdi03021]
    METDI3461 (nusA)
   03009 Ribosome biogenesis [BR:mdi03009]
    METDI3461 (nusA)
Transcription machinery [BR:mdi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     METDI3461 (nusA)
Ribosome biogenesis [BR:mdi03009]
 Prokaryotic type
  rRNA transcription factors
   METDI3461 (nusA)
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_1 KH_2
Other DBs
NCBI-ProteinID: CAX25104
UniProt: C7C8G3
Position
complement(3384064..3385701)
AA seq 545 aa
MAVVSANRLELLQIAEAVAREKVIDRQIVIEAMEEAIAKAARSRYGAETDVHAEIDTKSG
ALRLSRHLLVVDQVENDAREITLDQARRYNPGALIGDVISDTLPPFDFGRVAAQSAKQVI
VQKVRDAERARQYDEYKDRIGEILNGVVKRVEYGNVIVDLGRGEGIVRRDEMIPRETFRP
GDRIRAYLFDVRSEVRGPQIFLSRSHPQFMAKLFGQEVPEIYDGIVEVKAVARDPGSRAK
IAVISRDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSEDQATFIVNALQPAEVVK
VVLDEEADRIEVVVPDDQLSLAIGRRGQNVRLASQLTGWDIDILTEAEESERRQKEFAER
TQAFMEALDVDETVGQLLAAEGFRNVEEIAFVDVAELSNIQGLDEETGAEIQARAQDYLA
RIEQEQDDRRRELGVEDELREIDGITTAMMVALGENEVKTVEDLAGCATDDLVGYTEGRG
PEAVRHAGYLDGFELSRAEAEALIMAARLKAGWIDALPEPEGEAAEGDAQDGEATEEATA
EPQQA
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggctgtcgtcagcgccaatcggctcgaactcctgcagatcgccgaggcggtcgcccgc
gagaaggtgatcgatcgccagatcgtcatcgaggcaatggaagaggcgatcgcgaaggcg
gcccgctcccgctacggcgccgagaccgacgttcacgccgagatcgacacgaagagcggc
gcgctgcgcctgtcccgccacctcctcgtggtcgatcaggtcgagaacgatgcccgtgag
atcaccctcgatcaggcccgccgctacaaccccggcgccctcatcggcgatgtgatctcc
gataccctgccgccgttcgatttcggccgcgtcgcggcgcagtcggccaagcaagtcatc
gtccagaaggtgcgcgacgccgagcgcgcccgccagtacgacgagtacaaggaccggatc
ggtgagatcctcaacggcgtggtcaagcgcgtcgagtacggcaacgtcatcgtcgatctc
ggccgcggcgaaggcatcgtccgccgcgacgagatgatcccgcgcgagaccttccgcccc
ggcgaccgcatccgcgcctacctgttcgacgtgcgctccgaggtgcgcgggccgcagatc
ttcctgtcgcgctcgcacccgcaattcatggccaagctgttcggccaggaagtgccggag
atctacgacggtatcgtcgaggtgaaggcggtcgcccgcgatcccggctcgcgcgccaag
atcgccgtcatctcccgcgattcttcgatcgacccggtcggcgcctgcgtcggtatgcgc
ggctcccgcgtccaggcggtggtcggcgagcttcagggcgagaagatcgatatcattccg
tggtcggaagatcaggcgaccttcatcgtcaacgcgctgcagccggccgaggtcgtgaag
gtggtgctcgatgaggaggccgaccgcatcgaggtggtggtgcccgacgaccagctctcg
ctggccatcggccgccgcggccagaacgtgcggctggcctcgcagctcaccggctgggac
atcgacatcctgaccgaggccgaggaatccgagcggcgccagaaggagttcgcggagcgc
actcaagcgttcatggaagcgctcgacgtggacgagacggtcggccagttgctggccgcc
gaaggcttccgcaacgtcgaggaaatcgccttcgtcgatgtcgccgagctctccaacatc
cagggcctcgacgaagagaccggtgccgagatccaggcccgcgcccaggattacctcgcc
cggatcgagcaggagcaggacgaccgccgccgcgaactcggcgtcgaggacgagctgcgc
gagatcgacggcatcaccaccgcgatgatggtggcgctgggcgagaacgaggtgaagacc
gtcgaagatctcgccggctgcgccaccgacgacctcgtcggctacaccgaaggccgcggc
cccgaggccgtacgccatgccggctatctcgacggattcgagctgtcgcgggccgaggcc
gaggcgctgatcatggccgcccgtctgaaggccggctggatcgacgcgctgccggagccg
gagggtgaagccgccgagggcgacgcccaggacggcgaggcgaccgaggaagcgacggcc
gagccgcagcaggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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