KEGG   Methylorubrum extorquens DM4: METDI5746
Entry
METDI5746         CDS       T00947                                 
Symbol
depP
Name
(GenBank) periplasmic serine protease (DegP)
  KO
K04771  serine protease Do [EC:3.4.21.107]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi01503  Cationic antimicrobial peptide (CAMP) resistance
mdi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    METDI5746 (depP)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    METDI5746 (depP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdi01002]
    METDI5746 (depP)
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mdi03110]
    METDI5746 (depP)
Enzymes [BR:mdi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.107  peptidase Do
     METDI5746 (depP)
Peptidases and inhibitors [BR:mdi01002]
 Serine peptidases
  Family S1: chymotrypsin family
   METDI5746 (depP)
Chaperones and folding catalysts [BR:mdi03110]
 Other chaperones and cochaperones
  DegP / HtrA
   METDI5746 (depP)
SSDB
Motif
Pfam: Trypsin_2 PDZ_2 PDZ Trypsin PDZ_6 Tricorn_PDZ DUF6288 Peptidase_S46 GRASP55_65 Peptidase_S29
Other DBs
NCBI-ProteinID: CAX27349
UniProt: C7C942
Position
complement(5732398..5733909)
AA seq 503 aa
MTMTVRRRAFASVAAAALVAGGAAGFGLTEPMTPAYAQALPKTPIEAPEHPPGSFANVVD
KVKPGVVAVKVKLDNSADDDDDSAGGPNLQQVPPQLREFFKRFGQGGPGGQGGRGMPQRG
ERGAVGSGFIISADGYVVTNNHVVDKAKTVQVTLDDNRTLDAKVIGKDPKTDIALLKITE
SGSYPYVQFGKSAPRVGDWVVAIGNPFGLGGTVTAGIVSARGRDIGAGPYDDFLQIDAPI
NKGNSGGPTFNVNGEVVGVNTAIASPSGGSVGLAFAIPAETVQTVVDQLRTDGKVVRGYL
GVQVQPVTKDIADGLGLDKAKGALVDHAENGTPAAKAGLKSGDVIESVNGAPVNDARDLS
RRIAGLKPGTEVKLAYLRGGKSDVATVELGTQPTDAKVASRSDSSSGGQARLGLSLAPAS
EIGLGDEGVAVMDVDPDGPAAAKGIAQGDVILDVAGTSVSKPSEVQAQIRAAESNGRKAV
LMRVKSAKGQTRFVAVALGKKEG
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgaccatgactgtccgccgccgcgccttcgcctccgtcgctgcagccgccctcgtcgcg
ggcggcgcggccgggttcggcctgaccgagcccatgaccccggcttacgcccaggccctg
ccgaagaccccgatcgaggcgcccgagcacccgccgggctcgtttgcgaacgtcgtcgac
aaggtgaagccgggcgtcgtcgccgtgaaggtgaagctcgacaacagcgccgacgatgac
gacgacagcgcaggcggccccaacctgcagcaggtgccgccgcagctgcgcgagttcttc
aagcgcttcggccagggcggtccgggtggtcagggcgggcgcggcatgccgcagcgtggc
gagcgcggcgcggtcggctcgggcttcatcatctcggcggacggctacgtcgtcaccaac
aaccacgtcgtcgacaaggccaagaccgtgcaggtcacgctcgacgacaaccgcaccctc
gatgccaaggtgatcggcaaggatccgaagaccgacatcgcgctgctcaagatcaccgag
agcggcagctatccctacgtccagttcggcaagagcgccccgcgcgttggcgattgggtc
gtcgccatcggcaacccgttcggcctcggcggcacggtgacggcgggcatcgtctcggcc
cgcggccgtgacatcggcgccggcccctacgacgacttcctgcagatcgacgcgccgatc
aacaagggcaattccggcggcccgaccttcaacgtcaacggcgaggtcgtgggcgtgaac
acggcaatcgcctcgccgtcgggtggctcggtcggcctcgccttcgcgatccccgccgag
acggtgcagacggtggtcgatcagctccgcaccgacggcaaggtagtgcgtggttatctc
ggcgtgcaggtccagccggtgaccaaggacatcgccgacgggctcggcctcgacaaggcc
aagggcgcgctggtcgatcacgccgagaatggcacgccggcggccaaggccggtctgaaa
tcgggtgacgtgatcgaatcggtcaacggcgccccggtcaacgatgcccgcgacctttcc
cgccgcatcgccggtctcaagcccggcaccgaggtgaagctcgcttatctgcggggcggc
aagagcgacgtcgcgacggtcgaactcggcacgcagccgaccgacgccaaggtcgcgagc
cgcagtgatagctcgtctggtggccaggcgcgcctcggcctcagcctggcccctgccagc
gagatcggcctcggcgacgagggcgtggcggtgatggatgtcgatcccgacggtccggcc
gcggccaagggcatcgcccagggcgacgtgatcctggatgtcgccggcaccagcgtctcg
aagccctctgaggtgcaggcgcaaatccgcgccgcagaatcgaacggccgcaaggcggtg
ctgatgcgggtgaagagcgccaagggccagacccgcttcgtcgccgtggccctcggcaag
aaggagggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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