KEGG T03194: 103407396

Malus domestica (apple): 103407396

Entry

103407396         CDS       T03194

Name

(RefSeq) SUPPRESSOR OF ABI3-5-like isoform X1

K13094

RNA-binding protein 5/10

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103407396
Spliceosome [BR:mdm03041]
Complex A
  Other components
   Complex A specific factors
    103407396

SSDB

Motif

Pfam:

RRM_1 OCRE G-patch G-patch_2 zf-RanBP

Other DBs

NCBI-GeneID:

103407396

NCBI-ProteinID:

XP_028951160

Position

2:complement(32516548..32526606)

AA seq 1083 aa
MDHGRYGHQQRWDNNSALEGYGAVHEPNFRANGSYDERRFIDERCSRDNVYPRNSFHRDV
LDGDNYPPPPPHAVGVWPHSRRRSYEEDLPIERETRRHEKQYMDSYHEMDNFLDHDSDTF
QDFDKFRDSYRSVNYRDPGFDRIARFGGRDRDDYAYDDFDSRPRSTHQNREDSRERDYDY
GRYSYDSDYDGSSRRDGNWRCRGSRESRDRERDKKCLSRETEQSPHRRHEQSRSRSISRG
HDDRPRSRSPRGRSHGRSHREDSYDDGRYEGTDKRRDRDEKRHREHYSVAPSATIVVKGL
SQKTNEEDLYQILAEWGPLRHVRVIKERNSGTSRGFAFIDFPSVGAARAMMDSMGDEGLV
VNDRKLFFEYSSKPTGGAGGSFGQENSIKLGHNTHNTHKSTTMPSDWMCISCEYVNFARR
TSCFQCNKARTEDAPAADISLSNQMTSAKKGSEAGPTHVLVVRGLDENADEEMLRYEFSK
HAAIKDLRLVRDKFTHVSRGFAFVHFHSVGDATKALEATNGTTLERNGQILRVAYAKSVL
GPGSSQSSSLAAAAIEAATFAQQYDAVGWAPKEYNPDDKQSTAGNEQNGGEMAVQQDGLA
PQSGFVWDEASGYYYDAASGFYYDPNTGLYYDGNNGIWYTYDNQTQQYIPCTDQNDNKTS
ADQSELSKASDGSSNRKAVISAPATTSTSEKAASLPDAVQAAAAAAIAAEKREKEKAKEI
KLASKSSILANKKKMSNVLTMWKQRSHEGQATRVALDDNQPSGSADDRPVSSVQSAKSKF
KTNVTKENTTSSSGVTATVSAAQITSSSGVTDTVSAAETVGLECSVMPRPVSNSIRGTVM
GVIRGSGRGVVKSDASFSGSSVGVSMPSTSAPGMAGSSASTNAVTPTVLTPFRTDASALG
SYTPAVATGSGKRRFSEMPLTPASAPKEPHTAYRDRAAERRSLYGSSVSFSDDVSDLGFA
ESNQDSASRKGSFDSMPFPPGVGGGRGVGDANIDSYEVITAEKAIDESNVGNKMLRNMGW
HEGLGLGRDGSGMVEPVQAQSVERRAGLGSQQKKLDPTLEVQAGDSYKTLIQKKALARFR
EMS

NT seq 3252 nt +upstreamnt +downstreamnt
atggatcacggtcgctatggtcatcagcaaagatgggataataacagcgctctggagggg
tatggtgcagtccacgagccaaactttcgggccaatggttcatatgatgagaggaggttt
atagatgaaagatgctcaagggacaacgtctatccaagaaactcttttcaccgtgatgtt
ctagatggggataactatccacctccacctcctcatgctgttggtgtctggccacactca
agaaggagaagttatgaggaagatcttccaattgagagggaaactaggcgacatgagaag
caatacatggattcatatcacgagatggataactttcttgatcatgacagcgatacgttt
caggattttgataaatttcgggatagctatcgtagtgtcaactatcgtgatcctgggttt
gacaggattgctcggtttggtggacgtgatcgtgatgattatgcttatgatgattttgac
tctaggccccgttctacccatcagaacagggaggatagtcgtgaaagggattatgactat
ggtcgatacagttatgattctgattacgatggaagtagtaggagagatggcaattggagg
tgtcggggatctcgtgaatctcgtgaccgagagcgtgacaagaaatgtttgagtagggag
acagaacagagtccacatagaaggcatgagcagtcccgttctcggtccatttctcgtggg
catgatgatcgccctagatcaaggtcccctagaggtcgaagccatgggcgaagtcatcga
gaggacagctatgatgatggacggtacgagggaactgataagcgaagggatcgtgatgag
aaacgccatagagaacattattctgtggccccatctgcaactattgttgtgaagggtctt
tcccagaagacaaatgaggaagatttataccagatccttgctgaatggggaccccttcga
catgtccgtgtgatcaaagaacgtaattctggcacttctcgtggttttgcgtttattgat
tttccttctgtgggagcagcacgcgctatgatggacagcatgggggatgaagggcttgtg
gtcaatgacaggaagctttttttcgagtatagtagtaagccaactgggggtgcaggtgga
tcttttggtcaggagaattccattaaattaggccataatacccataatacccataaaagc
accacaatgccatctgattggatgtgcataagttgtgaatatgttaattttgcacggcgc
acttcctgttttcagtgcaataaggcacgaactgaggatgctcctgcagcagatatttct
ttgtccaatcaaatgacttcagcaaagaaggggtctgaagctggtcctactcatgtcttg
gttgttcgtggactggatgaaaatgctgatgaggaaatgctgcgctatgagttctccaaa
catgctgcaattaaggatcttcgtcttgttagagacaaatttactcatgtttcaaggggg
tttgcttttgtacatttccattcggtaggagatgctacaaaagctcttgaagcaacaaat
ggaacaacacttgagaggaatgggcaaattttgagagtagcatatgcaaagagcgttctt
ggtccaggatcttcacagtcaagcagcctggcagctgctgcgattgaggcagccacattt
gcccaacagtacgatgctgttggatgggctccaaaggaatataatccagatgacaaacaa
tccactgcagggaacgagcaaaatggcggggagatggcagtacaacaagatggtttggct
ccacaatctggttttgtgtgggatgaggcatctggttattactatgatgctgcttctggg
ttctactatgacccaaatacaggcctttactatgatggtaacaacggcatttggtataca
tatgacaaccaaactcagcagtacatcccttgcactgatcaaaatgataacaaaacatct
gctgatcaatctgagctttccaaggcatcggatggttcaagtaatagaaaagcagtcatt
tctgctccagctacaacctcaacatctgagaaggctgcatcattaccagatgcagtccag
gctgctgcagcagcagcaatagctgcagagaaaagggaaaaggaaaaggcaaaagagatc
aaactggcttcaaagagcagtattttggcaaacaagaagaaaatgagtaatgtgttgaca
atgtggaagcaaaggagtcacgaagggcaagcaacccgtgtagctctggatgacaaccag
ccaagtggttcggctgatgatagaccagtttcttctgtgcagtctgcaaagagcaagttt
aaaactaatgtgacaaaggagaatactacatccagttcaggggttactgcaactgtttct
gctgcacagattacatccagttcaggggttactgacactgtttctgctgcagagactgtt
ggtttggagtgttcagttatgccaaggcctgtgagtaacagtataagagggacagtgatg
ggagtcataaggggatctggaagaggtgtagtgaaatcagatgcctcgttttcaggatca
agtgttggagtttccatgccttcaacttctgctcccggcatggcaggttcatctgcatca
acaaatgcagtcacccccacagttttgacaccctttagaacggatgcatctgcattgggt
tcttatacaccagctgttgctactgggagtggaaagagaagattttctgaaatgccacta
actcctgcttctgctcctaaagaacctcatactgcgtacagggatcgtgcagccgagaga
agaagcttatatggttcatcggtgtcttttagtgatgacgtatctgaccttggttttgca
gagtcaaatcaagattctgcgtcaagaaagggttcttttgattcaatgccttttccccct
ggtgttggtggaggacgtggggttggagatgctaacattgacagttacgaggtgattaca
gctgaaaaagcaattgatgagagcaatgtgggcaacaagatgcttcgcaacatgggctgg
cacgaaggcttggggttaggaagagatggaagcggaatggtagaaccagtgcaggctcag
tccgtggaacggagagcaggacttgggagtcagcagaagaagttagatcctactctcgag
gtgcaggccggagatagttacaagactctcattcagaagaaggcactggccaggttccgg
gagatgtcttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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