KEGG   Malus domestica (apple): 103416295
Entry
103416295         CDS       T03194                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3-like
  KO
K22647  ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103416295
Enzymes [BR:mdm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103416295
Ubiquitin system [BR:mdm04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    103416295
SSDB
Motif
Pfam: MINDY-3_4_CD UIM
Other DBs
NCBI-GeneID: 103416295
NCBI-ProteinID: XP_008352777
UniProt: A0A498JW58
Position
5:3968543..3976330
AA seq 619 aa
MANHEEEDLRMALRMSMQNSPPDPKRSKPRDGPAGAPAEEPSAVKTRRLQRELMAAAAEK
RMLVAKKSSPSASPSKVLSGSAGSCSGLAPKVVTKDKELSLEQVNLGKGLSEEDAKQLFS
MVFGSEVTKGILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLAAIQAFVLKYLLFYPAE
LGKVAPNMHQNTGSGTPSNSQCVATNNFASLTEDAKARVLIRSMGEILFLCGSNKRAVIA
TLSVIGEETERSEDRLNDEVITKSLEGLSIESAADLHKVLRVSTYTTQESAFQRLQAVLP
AFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNV
FDGKMDLGGGMSLKGISKTVEVGFLTLLESLNFCKVGQYLKSPKWPIWVVGSESHYTVLF
SLDTTVQDENELEGRESHIRKAFDAQDQSGGGGFISVEGFHQVLRETNVKLPTEKVDLLC
STGFIVWSEFWQVILDLDKSLGGLKDSTGLMGKKVFDLYHFNGIAKSDLNGSQTSSGGEI
PVQRPRLTKLRVSVPPRWTPEEYMTDVVVTSASSGNESGGKVSEIAKPEPAQHAPLVDCI
RTRWPRAVCNWVGDPPSIV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggcgaatcacgaggaggaggacctccgaatggcactgcggatgagtatgcagaattca
cccccggatcccaagcgtagcaaacccagggacggacccgccggagctccggctgaggag
ccgtcggcagtgaagacccggagacttcagcgagagctcatggctgctgcagctgagaag
agaatgctggtcgccaagaagtcttcgccttcggcttcacctagcaaggtgttgtccggg
tctgcgggttcctgttcgggtttggcgccaaaggtggtgacgaaggataaggaattgagt
ttggagcaagtgaatttgggaaaggggttgagcgaagaggatgcaaagcagctgttttcg
atggttttcgggtccgaggttaccaagggcattcttgcgcagtggagtaatcagggtata
aggtttagccctgatccagaaacatctatgggtctagtgcagcatgaaggtgggccctgt
ggcgttttagcagccattcaagcatttgttctcaaatacctacttttctacccagctgaa
ttaggtaaagttgcaccaaacatgcatcaaaatacgggttcagggacaccgtctaatagt
cagtgtgttgcaacaaataattttgcctctctaactgaagatgcaaaagcaagagtactt
attagaagtatgggtgagatattgttcttatgtggaagcaacaaaagggcggtgattgcg
actttaagtgttattggagaagaaactgagaggtctgaagacagactgaatgatgaagta
ataaccaagtcacttgaaggtctttcaatcgaatcggctgctgatttgcataaagtgcta
agagttagcacatacacaacacaagaaagtgcatttcagaggctccaagcagtgcttcct
gcttttcaaagtcgtatgggggcactgctgttccttatttctgctttactttctcgtgga
ctggacttagttcaatctgatagggacgaccccagcctaccccttgtcactgctccgttt
ggccatgcctcacaggaaattgtgaacttattgctctgcgggcaggcagtccctaatgtt
ttcgatggaaagatggatttgggtggtggcatgtctttaaaaggcatatcgaaaactgtg
gaagttggattcctcactctgttagaatccctaaatttctgtaaggttggtcagtatttg
aaaagtccaaaatggccaatctgggtagttggaagcgagtctcactatacagtccttttt
tctcttgataccactgtccaagatgagaatgaactggaaggaagggaatcacatattcgg
aaagcttttgatgcacaagatcagagcggcggcggtggttttattagtgtagaaggcttt
catcaagtccttagggaaactaacgtaaaacttccaactgagaaggttgacctcctctgc
agcacaggatttattgtatggagcgaattctggcaggtcattttggatttggacaagagc
ttaggaggcctgaaggattcaactggattgatgggtaagaaggtgtttgatctttaccat
tttaatggaattgcaaaatctgacctgaatggaagccagacaagctcgggaggcgagatt
ccagttcaaagacctaggctcacaaaattgagggtgtcggtacctccaaggtggactcct
gaagaatacatgacagatgtggtagtgacctcagcttctagtggtaatgaatctggaggg
aaagtctcagaaattgctaagccggagcctgctcagcacgcacctctggtggactgcata
agaacacgctggccccgtgctgtctgcaattgggtaggtgacccgcctagcatagtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system