KEGG   Malus domestica (apple): 103427529
Entry
103427529         CDS       T03194                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103427529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103427529
   03036 Chromosome and associated proteins [BR:mdm03036]
    103427529
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103427529
   Coactivators
    SAGA/TFTC/STAGA complex
     103427529
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103427529
    STAGA complex
     103427529
    TFTC complex
     103427529
    SAGA complex
     103427529
    SLIK complex
     103427529
SSDB
Motif
Pfam: TFIID_20kDa TFIID-31kDa
Other DBs
NCBI-GeneID: 103427529
NCBI-ProteinID: XP_028948742
Position
14:complement(1886072..1891098)
AA seq 567 aa
MDQQNSTTTPTPSASQPSIEPPPTAQSQPPPQPQPPPSSSLTTTPTSTPSPPSPNPNPKP
STPLPPQPLHQPQPPPQSLPPPSQPRPPSTLTRPPWQQQSHFHQYPSPSSSASSGPPPPP
SPSQPPPPRGGIAIGVSAHHTGPSTPQPTPYSSSYGHHFGGMGRGGVSVPEPVSNSSPSQ
VRPSMQGMQGIGMMGSLGSSSQMRPTGIPAHHPQRPVQSSLRPPSTASNQSPSSQNFQGH
SLLRVSSVGSASSSPNASQGLQPHTQPWLSSGPQGKPPIPSPSYRQQMNSPSMQQRSHLP
QQQQQSHPHPTASQQQHHPMPSAPQQQHHPLPSASQQQHHSLPSASPQQPLPSASQQQHT
SSVQQVQQSRVPQTTPRQQQITRVQGPVNPKSSTLVAAQPNTVQSGAQNKTLSPEIDESC
NRILGKRSIRELVNQIDPSEMLDPEVEEILMDIADEFVDSITTFSCSLAKHRKSTQLEAK
DILLHIEKNWNITLPGFGGDEIKGFRKPLTNDIHKERLAVIKKSIVATETANARNPTGQA
AGNAKGSLVKTPANIISSLNSKMREVT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggatcaacagaactccaccaccactccaactccctccgcctcccaaccatccattgaa
ccacccccaaccgcccaatcccagcctccacctcagcctcagccaccgccgtcctcctcc
ttaacaaccactccaacctccaccccaagccccccttccccaaaccctaaccctaaaccc
tcaaccccattgcccccacaaccactacatcaaccgcaaccgccaccccagtcccttcca
cccccttcgcagcccaggcctccctccacattgactcgtcctccttggcagcagcagtcc
cacttccaccagtacccttcgccttcttcttccgcttcgtctgggcctcctccgccgcct
tcaccctctcagcctcccccaccgaggggtggcattgccattggtgtttctgcgcatcac
accggcccttctactcctcaacccactccgtattcgtcttcctacgggcatcattttggt
gggatgggccgtggcggcgtctctgtgcccgaacctgtatccaattccagtccttcccag
gtgagaccatcaatgcaaggaatgcagggaatagggatgatgggttcactcggttctagt
tctcaaatgcggccaactgggattccggcacaccatccacagagaccagttcaatcctct
cttagaccaccatctactgcgagtaatcagtccccgtcttcccaaaatttccaagggcac
agccttttacgagtttcatcagttggatctgctagttcatcaccaaatgcatctcaaggt
ttgcagcctcatactcagccatggttgtcatctgggccacaagggaagcctcctattcct
tccccttcatataggcagcagatgaactcgccatccatgcagcaaagatcacatcttccg
cagcaacagcaacagtctcatccccatcctacagcttcacagcagcagcaccatccaatg
ccttcagctccccagcagcagcaccatcccctgccttctgcttcacagcagcagcaccat
tccctgccttctgcttcaccacaacaacccctgccttcagcttcacagcaacagcataca
tcatctgtgcaacaagttcagcaatcaagggtcccacaaaccacgcctcgtcagcaacag
atcacaagggttcagggccctgtgaatcctaagtcttccactcttgtagctgcacagcct
aacacagtccaatcaggggcccaaaataaaactcttagtccagaaatagatgaatcttgt
aataggattcttggcaaaagaagcatccgtgagctagtcaaccagattgatccatctgag
atgttggatccagaagttgaagaaattctcatggacattgcagatgaatttgttgattct
attacaacatttagttgctcactagccaagcatagaaaatcaactcaattagaagcaaaa
gacatacttctacatattgaaaagaattggaatataactctgcctgggttcggtggtgat
gagattaaaggcttcagaaaaccacttacaaatgatatccacaaggagcgtcttgctgtg
ataaagaagtccatagtagcaactgagacagcaaatgctaggaatcccactggacaagct
gctggaaatgcaaagggtagtcttgttaagacacctgccaacatcataagctccctaaac
tctaaaatgcgtgaagttacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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