KEGG   Malus domestica (apple): 103429292
Entry
103429292         CDS       T03194                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103429292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103429292
   03009 Ribosome biogenesis [BR:mdm03009]
    103429292
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103429292
Spliceosome [BR:mdm03041]
 Complex A
  U1 snRNP components
   U1 related factors
    103429292
 Complex B
    103429292
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103429292
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 103429292
NCBI-ProteinID: XP_028948168
Position
14:26664866..26668965
AA seq 637 aa
MYAYDNRHADVNSYRERRSDLMGPAPAAGGTAYGRGGGPAPYGGPSPPVAPYSARVGGPA
QGPGDFNGYPPFQPPSERFNIGRGGGNGSFGGRASNGHVGGGRGRGGSVGRFGGGGRGFD
GGRGGGRSFGGSRGGGAGFGGGRGVGGRGGRHGGSSRGDLDNIMLPKQDFGTLVPFEKNF
YAESPSVRAMSEHDVMVYRTRREITVEGHDIPKPIQMFEDANFPDYCLEAIAKLGFVEPT
PIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPALVHISAQPRLAQGEGPIALVLAPTRE
LAVQIQEEALKFGLRSNIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTN
LRRVTYLVLDEADRMLDMGFEPQIRKIVSQTRPDRQTLYWSATWPREVESLARQFLRNPY
KVIIGSASLKANQSINQVVEVVTEVEKYNRLIKLLKEAMVGSRILIFVETKKGCDYVTKQ
LRMDGWPALSIHGDKNQTERDWVLAEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPS
SLEDYVHRIGRTGRAGATGTALTFFTHANAKFARDLIKILQDAGQVVSPALATMARSSGS
FGGSGGNFRNRGRGGGFGNRGMISGSNTVPIGYKRPW
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtacgcctacgacaaccgacacgccgacgtcaactcctaccgtgagcgccgaagtgac
ctaatgggtccagcgcctgcggctggtggcaccgcttatggccgtggaggtgggcccgct
ccgtatgggggcccatcgcctccggttgctccgtattcggcaagggtgggtggaccggca
cagggtccaggagactttaatgggtacccgccgttccagcccccttccgagcggttcaat
atcggtcgaggtggtggtaatgggagctttggtggaagagcgtcgaatggacatgttggt
ggtggaaggggtcgtggtggtagtgttgggagatttggtggcggtggcaggggttttgat
ggaggccgtggtggcggtaggagcttcggtggtagtcgtggtggaggtgcgggtttcggc
ggtgggcgtggagttggtggaagaggaggtaggcatggtggctcgtcaagaggagacttg
gataatattatgcttcccaagcaagattttgggaccttggtaccttttgaaaagaatttc
tatgctgaaagtccttcagtgagggcaatgtcagagcatgatgttatggtgtatcgtact
aggcgggagattactgttgaagggcatgacatcccaaagccgattcagatgtttgaggat
gcgaatttccctgattactgcctcgaggcgattgcaaaattgggttttgttgaaccaaca
ccaattcaggctcaaggatggccaatggcattaaagggtagagatttaattggcatcgct
gagactggttctggtaagactttgtcgtatctgctgcctgctttggtacacattagtgcg
cagcctcggttagctcagggagaaggtcctattgcattagtattagcacctactcgagaa
ttggcagttcaaattcaagaagaagctttaaaatttggcttacgttccaatattaggagt
acttgcatttatggcggtgctccaaaaggaccccaaatacgcgaccttaaaagaggggtt
gagattgttatagctacgcctggccgactgatagatatgttggaagctcagcatacaaat
ttgcgaagagtcacttatctagttttagatgaggctgataggatgttggacatgggattt
gagccacagataaggaaaattgtttcccaaacccgaccagatcggcagacattgtattgg
agtgccacgtggccaagggaggttgaaagtttagcaaggcagtttttacgtaacccatat
aaggtaatcattggatcagcaagccttaaagcaaaccaatccataaaccaagttgttgaa
gttgtgacggaggtggagaaatacaataggctgatcaaattgctcaaagaagcaatggtt
gggagcagaattctgatatttgtggagacgaaaaagggatgtgactacgttactaaacaa
ttgaggatggatggatggccagctctatccatccatggtgataaaaaccagactgaaagg
gactgggtcttggctgagtttaaaagtggcaggaacccaataatgactgccaccgatgtg
gctgcgcggggtcttgatgtgaaggacataaaatgtgtgatcaattatgattttccatca
agccttgaggattatgtccacaggattggaagaactggacgtgcaggagcaacaggaact
gctttaacctttttcacgcacgcaaacgcaaaattcgctagggatctaatcaagatcctt
caagatgcaggtcaggttgtgagccccgcattggctacaatggcccgatcaagtggtagt
ttcggaggatccggagggaacttccgcaatagaggacgaggaggaggatttgggaaccgg
ggcatgatttctggttcaaataccgttcctatcggttacaagagaccttggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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