KEGG   Malus domestica (apple): 103445786
Entry
103445786         CDS       T03194                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
mdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103445786
   03015 mRNA surveillance pathway
    103445786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103445786
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103445786
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 103445786
NCBI-ProteinID: XP_008383052
Position
10:30064059..30069969
AA seq 404 aa
MAKPTRARRSPSGSASGSSSRSRSRSRSFSGSDSHSSPLSRSRSRSRSFTSSSSPSRSGS
SRSRSPPASRKNPEVAKRGRSPPPQSKRASPPPRKASPVHAVHESLVLHIDALTRNVHEG
HLREIFCNFGEVVNVELAMDRTVNLPKGFGYVEFKIRADAEKAQLYMDGAQIDGNVVRAK
FTLPQRQKVSSPPKPVATAPKRDTVKTDGVSADKDAPKRPREASPRRRGALSPRRRSPVS
RRGESLRRALDSPPRRHAASPARPYCRGGSPPRRRLASPSRGRSGSPPPRRRSPIRRIQG
SPIRRRSPGPPRRGSPTRRFRSPPRRSPIRRRTRSPIRRPGRSRSRSISPRRGRAPATRR
GRSSSSGSPSPRQVPRKISHSPRRPLRGRSSSKSSSSSSPPRKP
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggcgaagccaacccgagcccgtcgctcgccgtcaggctccgcatccggctcatcctcc
cgctcccgctcgcgttcccgctccttctcaggctccgactcccactccagcccgctttct
cgctcccgatctcgctccaggtccttcacctcttcctcctctccgtctcggagtggcagc
tctcgcagccgtagcccccctgcctccagaaaaaatcctgaagttgctaaacgaggtcgt
tctccaccgccacaatctaaaagggcatctccacccccaaggaaagcttctccagttcat
gcagttcatgagtcacttgttcttcacattgacgcactaacaaggaatgtgcatgaaggc
catttacgagaaatattctgtaactttggtgaagttgtcaatgtggagctggcaatggat
cgtactgttaatcttccaaaaggatttggatatgttgagttcaaaatacgagcagatgct
gaaaaagcacaattatacatggacggtgctcaaattgatggtaatgtcgttcgagcaaag
tttacattacctcaacgtcagaaggtgtcttctccccctaagcctgttgccactgctcca
aagagagacactgtgaaaactgatggtgtcagtgctgacaaagatgcaccaaagcgaccg
agggaagcttctcctcgtcggagaggtgctctctcaccacgaaggagatcacctgtatct
cgaagaggtgaatctctaagacgagcattagattctccaccgcgtcgtcatgctgcctca
cctgcgcgtccctactgccgtggtggttcacctccaaggaggaggcttgcatctccatcc
agaggtcgttctggatcaccgccaccaaggcgacgttcccctattagaaggatacaagga
agtcccattcgtagacgctctccaggacccccaaggcgtggttcacctactagacggttt
cgtagccctcccagaaggtctccaattcgtaggcggacccgttctcccattcgtaggcct
ggtcgatcacgttcaaggtcaatctcgccgcggagaggtcgagcaccggctactagacgt
gggaggtcatcgtcatctggatcacctagtccacgacaggtaccccgaaaaatctctcat
agtccaagaaggcctttgaggggaagaagcagtagcaagagcagcagcagcagttcaccc
cctcgtaagccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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