KEGG   Malus domestica (apple): 103447435
Entry
103447435         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: phosphomethylpyrimidine synthase, chloroplastic
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
mdm  Malus domestica (apple)
Pathway
mdm00730  Thiamine metabolism
mdm01100  Metabolic pathways
mdm01240  Biosynthesis of cofactors
Module
mdm_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    103447435
Enzymes [BR:mdm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     103447435
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-GeneID: 103447435
NCBI-ProteinID: XP_008384842
Position
11:complement(6740942..6744191)
AA seq 648 aa
MASVHSALTSVVCKNGSHSSAAKFPATTFLPGFDAVGRLSSPFKKEVCLSSLSSGAKATL
TFDPPATNSEKPKLPRHTADPASPDFLPLPSFEQCFPKSTKEHREVVHEETGHVLKVPLR
RVHLAGDEPPFDNYDTSGPQNISPRVGLPKLRKDWIERRDKLGAPRYTQMYYAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVVS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSPVPVGTVPIYQALEKVDGIA
ENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMXKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYG
SAEEAVIRGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYIKAAER
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggcatcggtgcatagtgccctgacatcggttgtgtgcaagaatggcagtcattcttct
gcagcaaagttcccagctaccaccttcttgcccgggtttgatgccgtggggcgtctttca
agcccgttcaagaaggaagtgtgccttagttccctgagctcaggtgccaaagctacactt
acctttgatcccccagcaaccaattccgagaaacccaagctaccaaggcatacagccgat
cccgcttctcctgattttctgcctcttccgtcctttgaacaatgttttcccaagagcaca
aaagaacacagggaagttgttcacgaagaaactggccatgtgctcaaagttccccttcga
cgagtccacctggctggggatgaacctccattcgacaactatgacactagtggtccacaa
aacataagcccgcgcgttggtctccctaaactgcggaaagattggattgagaggcgagac
aaattaggtgcaccaagatacactcagatgtactatgctaagcagggaattataactgag
gagatgttgtactgtgctgctcgtgagaagcttgacccagagtttgtgagatcagaagtg
gctcgtgggcgggcaattatcccttccaataagaagcacttggagctggagccaatgatc
gttgggagaaaatttctggtcaaggttaatgcaaacataggaaactctgctgttgtcagc
tctatcgaagaggaagtttataaagtccagtgggcaactatgtggggtgctgacactgtc
atggatctgtctacaggacgtcacatccatgagacccgtgagtggatcctacgtaactcc
cctgtgccagtagggacagtacccatttatcaagcgcttgaaaaagtggatggaattgca
gaaaacctgaactgggaagtgttcagagaaactcttattgaacaagccgagcagggtgta
gattacttcaccatccatgccggggttctactgcggtacatcccactaacagcaaagcgt
atgacaggaattgtttcacgaggaggatccattcatgcaaagtggtgcttagcttatcac
aaagagaattttgcttatgagcactgggatgacatactcgacatctgcaatcaatatgat
gtcgccctgtcaattggtgacgggctgagacctggttcgatttatgatgctaatgacact
gcacagtttgcagagctgttaactcagggagaactgacccgtagggcatgggaaaaggat
gtgcaggtaatgaatgaagggccagggcatgttccaatgcacaagattccggaaaacatg
nnaaaacagcttgaatggtgtaatgaagcgcctttctacactcttggtcctctaacaact
gatattgctcctggatacgatcacatcacctctgccattggtgctgccaacattggggct
ctaggcaccgcccttctctgttacgtaaccccgaaggagcatctgggattgccaaaccga
gatgatgtgaaggctggagttatagcatataagatagctgctcatgccgctgatctagcc
aaaggtcacccacatgctcaagcctgggatgatgcattgagcaaggcaagatttgagttc
cggtggatggaccagtttgccttgtcactagaccctatgactgccatgtcattccatgac
gaaaccctgccagcagatggtgccaaggtggcccatttttgctccatgtgcggtccaaag
ttctgttcaatgaagataacggaggatgtgaggaagtatgctgaagagcatggttacggg
agtgctgaggaagctgtgatccgtggaatggatgctatgagtgctgagtttcttgctgcc
aagaaaactgtgagcggggaacagcatggtgaagttggaggggaaatttacttgccagaa
agttatataaaagctgccgagaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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