KEGG   Malus domestica (apple): 103451368
Entry
103451368         CDS       T03194                                 
Name
(RefSeq) protein HASTY 1 isoform X1
  KO
K14289  exportin-5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103451368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103451368
   03036 Chromosome and associated proteins [BR:mdm03036]
    103451368
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    103451368
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     103451368
SSDB
Motif
Pfam: Exportin-5 Xpo1
Other DBs
NCBI-GeneID: 103451368
NCBI-ProteinID: XP_028945949
Position
12:complement(30948607..30956579)
AA seq 1202 aa
MEESSNSVATNVAQAIAVALDWSSTPDARKAAVAFLESIKNGDVRILANTAFLLVKKDWS
SEIRLHAFKMLQHLVRLRWDELSSTERRNFANITVGLMSDIASPSEEWALKSQTAALVAE
MVRREGLNLWQELFPTLVSLSDKGPIHAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYTLLERHFGAALSEAGKQQFDLAKQHATTVTATLNAVNAYSEWAPLPD
LAKSGIIHGCGFLLSSPDFRLHACEFFKLVSQRKRPIDDTSAPEFDSAMSNIFQVLMNVS
KEFLYRSSPGAGVIDESDIEFAEYICESMVSLGSTNLQCIAGDSAVLPLYLQQMLGFFQH
FKLALHFQSLNFWLALMRDLMSKTKAVAHSAGDGSDPVDIERRKILSFLNDDMCSTILDV
SFQHMLKREKVIHGTAFSLGQLELWSDDVEDKGTFGQYRSKLLELIKLVALYKPLIAGSK
VSERIDTIIKTLLLSPMPAQDLVVMESMQSALENVVSTIFDGSNEIAGGHSEVQLELCRM
FEGLLQQLLSLKWTEPALVEVLGHYLDAMGSFLKYFPDAVGSVINKLFELLNSLPFVVKQ
DPSTSSARYARLQICTSFIRIAKTADTSVLPHMKAIADTMAYMKREGSLLRGEHNLLGEA
FLVMASAAGIQQQQEVLAWLLEPLSQQWTQIEWQNNYLSEPLGLVRLCSETPVMWSVFHT
ITFFEKALKRSGTRKSQSNLQSNSTESSMPFHPMASHLSWMLPPLPKLFRALHSLWSPTV
YQILPGEIKAAMTMSDVEQFSLLGEGNPKLPKGNIAFANGSHISASKEGYVEPNESDIRN
WLKGIRDSGYNVLGLATTVGDSFYKCLDSQSVALALVENIYSMEFRHIRLLVHSVLIPLV
KFCPVDLWEAWLEKLLLPLFQHSQQALSCSWSSLLHEGRAKVPDAHAILAGLDLKVEVIE
EKLLRDLTREICSLLSVTASPQLNAGLPSLEHSGHVHRVDISSLKDLDAYASSSMVGFLL
KHKGLALPALQICLEAFTWTDGEAMTKVSSFCSALIGLAVSTNSMELLQFVSKDLFSAII
QGLALESNAFISADLIGHCRDIYIHLCDRDPTPRQILLSLPFIKQHDLLAFEEALTKTSS
PKEQKQHMKSMLVLATGNKLKALAVQKSVNVITNVSTRPRSTANTTETRADDGETVGLAA
IL
NT seq 3609 nt   +upstreamnt  +downstreamnt
atggaagagagcagcaacagcgtggctaccaacgtcgcccaagccattgccgtagctctc
gactggagctccactcccgacgcccgcaaagcagccgttgcattcctcgaatcgattaaa
aacggagatgtgcgaattttggcaaacactgcgtttcttctggtgaagaaggattggtct
tccgaaattcggttgcatgcgtttaaaatgttacagcatttggtgcgattgcggtgggac
gaactaagctctacagagcgtagaaactttgcaaatatcactgttggtttaatgtctgat
attgcaagtcctagtgaggagtgggcattaaaaagtcagacagcagcccttgttgccgag
atggttagaagggaaggactaaatctatggcaagaactgtttccaactctggtttcatta
tccgacaagggtcctattcatgctgagttagtctccatgatgctaaggtggcttcctgaa
gatattactgttcacaatgaagatttggaaggagatcggagaaggctattgctgcggggg
ctgacccaatctttacctgagattttgcctttattatacactttactagagaggcacttc
ggagctgcgttgagtgaagcaggtaaacaacaattcgaccttgcaaagcaacatgcaaca
acagtaacagctactttgaatgctgttaatgcatactctgaatgggctccattgcctgat
cttgctaaatctggtataattcatgggtgtggtttcttactttcttcacctgactttcgt
cttcatgcttgtgagtttttcaaacttgtttcccaaaggaagagacctattgatgatacc
tctgctcctgaatttgattctgcaatgagtaatatctttcaagtattgatgaatgtctct
aaagaatttttgtacagatctagccccggtgctggggttattgatgaaagcgatattgag
tttgcggaatatatatgtgaaagtatggtgtctttgggttccacaaacttgcaatgtatt
gctggtgatagcgccgtgctacctctttatttacaacagatgctggggtttttccaacat
tttaagctagctcttcattttcaatctctcaacttttggctggcactaatgagagacttg
atgtcaaagacaaaggctgttgctcactcagctggagatggttctgatccagtcgatatt
gaaaggagaaaaatcttaagttttttgaatgatgatatgtgtagtacaattctggatgta
tctttccaacacatgctcaagagagaaaaagtaattcacgggacagcattttctttaggg
caattggaattatggagtgatgatgttgaggacaaggggacttttggccagtatcgttca
aagttgttagaactgatcaagctggttgctttgtacaagcctcttatagctggttctaaa
gtttctgaaagaattgatacaatcatcaaaaccctcttgctttctccaatgcctgctcag
gacttagttgtgatggaaagcatgcagtcggctttagaaaatgttgtaagcactattttc
gatggatcaaatgaaattgctgggggtcattctgaagttcaacttgaactatgcagaatg
tttgaaggtttgcttcagcagcttctttctttgaagtggactgagccagcccttgtagaa
gtacttgggcactacttggatgcaatgggttcatttttgaagtattttccagatgcagtg
ggcagtgtcattaataaattatttgagctcctaaactcgcttccttttgttgttaagcag
gatccatccacaagtagtgcacggtatgcaaggttgcaaatttgtacatcgtttattcgt
atagccaaaactgctgacacaagtgttctgcctcacatgaaggctatagccgacaccatg
gcgtatatgaaaagagaaggttctttacttcgtggtgaacacaatcttctaggtgaagcg
tttcttgtcatggcttctgctgctggaattcagcagcaacaagaagttctggcctggtta
ctagaacctttaagccagcaatggacacaaattgagtggcaaaataattatctatctgaa
ccacttggtcttgttcgtttgtgctccgagaccccagttatgtggtcagttttccacact
atcacattctttgagaaggcacttaagagaagtggaaccagaaaatcccagtcaaatcta
caaagcaactcaacagaaagttctatgccctttcaccctatggcttctcatctatcatgg
atgctgccacctcttccaaaactatttcgtgccttacattccctttggtctccaactgta
taccaaatactacctggagagattaaagctgcaatgaccatgagtgatgttgagcaattc
agtcttcttggtgaaggaaaccctaaattgccaaagggtaatatagccttcgccaatgga
tcccatattagtgcaagtaaggaaggatatgtagagccaaatgaatcagacatacgaaat
tggttgaaaggtattagagacagtgggtacaatgtattgggcctggcaaccactgttggg
gactcattttacaaatgtttggatagtcaatctgttgccctagccctggtggagaatata
tattcaatggaattcaggcatatccggctgcttgttcattcagttttgattcctttggtt
aaattttgtcctgtggatttgtgggaggcatggttggaaaagcttttgctcccattattc
caacactcccaacaggctcttagttgctcctggtccagtcttctacatgaagggagagca
aaggtcccagatgcccatgccatacttgcggggttggacttaaaagtggaagtaatagaa
gaaaagctacttagggatctaactcgggagatttgttcactcctctctgttacagcttcg
ccacagctaaatgctgggcttccttccttggagcattctgggcatgttcatcgtgttgac
atatcttcgctcaaagatttggatgcatacgcatcaagctccatggtcggtttccttttg
aagcacaaaggtcttgcccttccagcgctgcagatatgtttagaagcttttacatggacg
gatggtgaagctatgacaaaagtttcttccttttgttccgctttgattggtttagcggtg
tcgacaaatagtatggagctcctgcaatttgtttctaaggatctcttttctgcaattatc
caaggtttagcccttgagtcaaatgctttcatcagtgctgatttgattggtcactgtcgt
gatatatatatacatctttgtgatagagatccaactcctaggcagattctgctctcgctc
ccttttatcaaacagcatgatttgcttgcttttgaagaagctttgacaaagacatctagt
cccaaagaacaaaagcaacatatgaaaagcatgctcgtattagctactggtaacaagtta
aaagcgcttgctgttcagaaaagcgtaaatgtcataacaaatgtatcaacgaggcctcgt
agcacagccaacaccactgaaaccagagcggacgatggagagactgttggactggcggcc
atattgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system