KEGG   Malus domestica (apple): 103453650
Entry
103453650         CDS       T03194                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog isoform X1
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
mdm  Malus domestica (apple)
Pathway
mdm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103453650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103453650
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103453650
SSDB
Motif
Pfam: Utp21 WD40 ANAPC4_WD40 NBCH_WD40 WD40_like VID27 Nbas_N
Other DBs
NCBI-GeneID: 103453650
NCBI-ProteinID: XP_008391428
Position
13:complement(23133718..23143070)
AA seq 903 aa
MGIFEPFRAIGYTTSSVPFSVQRLGTETFVTVSVGKAFQIYNCAKLSLVLVGPQLPKKIR
ALASYRDYTFAAYGNEIAIFKRAHQAATWSSHNAKVISLLLFGEHILSVDVEGNLFIWAF
KGIEENLTPIGHVMLANNFSPSCIMHPDTYLNKIIIGSQEGSLQLWNISTKKKLYEFKGW
NSSICSCVSSPALDVVAVGCADGNIHVHNIRYDEELVTFSHSARGAVTALSFSTDGKPLL
ASGGSSGIISIWNLEKRRLQSVIRDAHDGSILSLHFLVNEPVLMSSSSDNSIKMWIFDTT
DGDPRLLRFRSGHSAPPRCIRFYANGRHILSAGQDRAFRLFSVMQDQQSRELSQHHISKR
AKKLKMKEEEIKLKPVISFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGEHILKPR
PENPTPVKACAISACGNFAVLGTVDGWVERFNLQSGISRGSYMDTSERRSFAHDGEVVGI
ACDSTNTLMISAGYHGDIKVWNFKGRDVKSRWEVGCSVVKIVYNRLNGLLAVVADDLIIR
LFDVVASRMVRKFEGHTDRVTDMCFSEDGKWLLSSSMDGSLRVWDVILARQIDALHVDVS
ITALSLSPNMDVLATAHIDQNGVYLWVNQSMFCGASKVDSYAKEVRSVKLPSISSTKGSQ
DEDSDEPIVDHPQSKDAPAFTTLDLQIPDLVTLSLLPKSQWQSLINLDTIKERNKPIEPP
KKPERAPFFLPSIPSFSGEILFKSTGSENEEAKGDNVEDNRIKSGLAPSQFLQHLQSSAE
MKNFSAFTDYIKSLSPSTLDMELQMLRIVDDEEEEHESRPELLSIELLLDYFIHETSCRN
NFDFVQAVIKVFLKIHGETIRCQSRLQDKAREFLDIQCKTWQRVEKLFQSTSCVVAFLSN
SRF
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgggaatattcgagccgttcagagcaatcggctacacaaccagctccgtgcccttctct
gttcagcgcctcggcaccgaaaccttcgtcactgtctccgtcggcaaggccttccaaatt
tacaactgtgcaaagctcagtctcgtcctcgttggtccacaattgccaaagaagattcga
gctcttgcttcctaccgtgattatacatttgctgcatatgggaatgagatagccattttt
aagcgagctcatcaggcagcaacatggagcagccataatgccaaggtcatttctttgcta
ttgtttggagagcatatcctaagtgttgatgttgaaggtaatctgtttatatgggcattc
aaaggaattgaggagaaccttactccgatcggacatgttatgttagccaacaactttagt
cctagctgtataatgcatccggatacctacctaaataagattattattgggagtcaggaa
ggttctcttcaactttggaacatcagtacaaagaaaaaactctatgagttcaagggatgg
aattcttcaatctgcagttgtgtttcatctcctgcactagatgttgttgcagttggttgt
gctgatggaaatattcatgttcacaacattcgttacgatgaagagctagtcacattttct
cattcggcacgaggtgctgtgactgccttatctttcagcacagatgggaagcctcttcta
gcatctggaggttcttctggtatcataagcatatggaatcttgaaaaaagaaggcttcaa
tcagtaataagagatgcccatgatggttccatactatcacttcactttcttgtgaacgaa
cccgtgctaatgagttcatcatctgacaattctatcaaaatgtggatttttgacacaact
gatggagatcctcgacttttacgattcagaagtggtcatagtgctcctccacgatgcata
aggttttatgcgaatgggagacacattctatcggctggtcaggaccgtgcatttcgcctt
ttctctgtaatgcaggatcagcaaagtagagagctttctcagcatcacatatccaaacga
gcaaagaaactgaagatgaaggaagaagagataaaactgaagcctgtcatctcttttgac
tgtgctgaaataagagagcgagattggtgcaatgtggttacatgccatatggatactgca
gaggcatatgtatggagacttcaaaactttgttcttggtgagcatattctgaagccaaga
ccagaaaaccccacaccagtgaaggcttgtgccatcagtgcatgtggcaattttgctgta
ctagggacagtggatggttgggttgagcggttcaacctccaatcaggaatcagtcgaggc
agttacatggacacgtcagaaagaagaagctttgcccatgatggggaagtggttggaatt
gcttgtgattcaacaaatactctaatgataagtgcaggatatcatggagacataaaggtt
tggaatttcaaggggcgtgatgtaaaatctagatgggaagttgggtgctctgttgtcaag
attgtatacaatcgtttgaatggtcttttggctgttgtggccgatgacttaatcatccgt
ttgtttgatgttgtggcatcaagaatggttcgtaaatttgaaggccatacagatcgtgtt
acagacatgtgttttagtgaggatgggaaatggcttttgtcatcaagtatggatggaagt
cttcgagtctgggatgttattttagcaagacaaatagatgcgttgcatgttgacgtgtct
ataacagcattgtctctgtcaccgaatatggatgttctagcgactgctcatatcgaccaa
aatggggtctatctttgggtaaatcaatcgatgttttgtggagcttcaaaagttgattct
tatgcaaaggaagttaggagtgttaagttgccatctatctcttcaacaaaaggttctcaa
gatgaggactctgacgagcctattgtggaccatccgcagtctaaggatgctcctgctttt
acaactcttgacctgcaaattccagatcttgttactctctcattattgcctaaaagccag
tggcaaagcttaatcaatttagacactataaaggaacgaaataaaccaattgaaccgcca
aaaaaacctgaaagggctcctttctttttgccttcaattccctccttttcaggagaaata
ttatttaagtccactggatcagaaaatgaggaggccaaaggtgataacgtagaagacaat
agaataaaatctggtctggcaccatcacaattcttgcaacatcttcagtcgtccgcagaa
atgaagaatttttcagcatttaccgactatatcaaaagtttgtctccatcgactctggat
atggaactccaaatgcttcggattgttgatgatgaggaggaagaacatgaaagccggcca
gagttgctttcaatcgaactgcttcttgattattttatacatgagacttcatgtagaaac
aattttgactttgtacaagctgtaatcaaggtgtttctcaagatccatggcgaaacaatt
cggtgccaatcaagactgcaggacaaggcccgggagttcctagatattcaatgcaaaaca
tggcaaagagtagaaaaactgtttcaaagtacaagttgtgtggtcgcttttcttagcaat
tcacggttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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