KEGG   Monodelphis domestica (gray short-tailed opossum): 100010240
Entry
100010240         CDS       T01031                                 
Symbol
HOXA1
Name
(RefSeq) homeobox A1
  KO
K09301  homeobox protein HoxA/B/D1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100010240 (HOXA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mdo03000]
    100010240 (HOXA1)
Transcription factors [BR:mdo03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    100010240 (HOXA1)
SSDB
Motif
Pfam: Homeodomain PHC2_SAM_assoc Optomotor-blind Homeobox_KN
Other DBs
NCBI-GeneID: 100010240
NCBI-ProteinID: XP_001363080
Ensembl: ENSMODG00000000507
UniProt: F6Y630
Position
8:297424681..297430751
AA seq 337 aa
MDNARMSASFLEHPILNAGDSGTCSARAYHPDHGITTFQSCAVSANSCGGDERFLVGRGV
QMSPPHHPHAHHHYPQPAAYQHLNNLGMSYSHSSCGPGFGSQNFGAGYSPYSLNQEADVS
GGYPSCAPAVYSGTLSSSMVQHHHHHHQGYAGGTVGSPQYIHHSYGQEAQNLTLANYNNS
LSPLHASHQETCRSPSAETSPPAQTFDWMKVKRNPPKTGKAGEYGYIGQPNTVRTNFTTK
QLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPTT
PSRIEEKAEESSDKSTSSPCGPSSPASSTSDTLTTSN
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggacaatgcgagaatgagcgcctccttcctggagcaccccatcctcaacgcaggagac
tcggggacctgctccgcccgagcctaccacccggaccatgggattacaactttccagtcg
tgtgcggtcagtgccaacagctgcgggggcgacgagcgcttcctggtgggcaggggggtc
cagatgagtcccccccaccaccctcacgcccatcaccactacccccagccggccgcctac
cagcacctcaacaacctgggtatgtcctattcccactccagctgtggcccggggttcgga
tcgcagaacttcggcgcaggttacagcccctactcattaaatcaggaagcagacgtaagc
ggcgggtacccctcgtgcgctcccgctgtttactctggaactctctcatcttccatggtc
cagcatcaccaccaccaccaccagggttatgccgggggcacggtgggctcgcctcaatac
attcaccactcatatggacaagaagcgcagaatctgaccctggcaaattataataactcc
ttgtcccctctccatgccagccaccaagagacctgtcgctctccttcagcagagacgtca
cctccagcacagacctttgactggatgaaagtcaaaaggaatccccccaaaacagggaaa
gctggtgaatacgggtatattggccaaccgaacacagttcgcaccaacttcaccaccaag
cagcttactgagctggaaaaggaattccatttcaacaagtacctgactcgggccaggagg
gtggagatcgcagcctcgctgcaactcaacgagacccaggtgaagatctggtttcagaac
cgccgcatgaagcaaaagaagcgagagaaggagggcctgctgcccatctcgcccaccacc
ccatcacggatcgaggagaaggccgaggaatcctcagacaaatctacctcctctccctgt
ggcccctcttccccagcctcctctacctcagacactctgactacctccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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