KEGG   Monodelphis domestica (gray short-tailed opossum): 100011241
Entry
100011241         CDS       T01031                                 
Symbol
RAG1
Name
(RefSeq) recombination activating 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04068  FoxO signaling pathway
mdo05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    100011241 (RAG1)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    100011241 (RAG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdo04121]
    100011241 (RAG1)
Enzymes [BR:mdo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100011241 (RAG1)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100011241 (RAG1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-RING_10 zf-RING_UBOX zf-C3HC4_4
Other DBs
NCBI-GeneID: 100011241
NCBI-ProteinID: XP_007497394
Ensembl: ENSMODG00000024470
UniProt: Q28463
Position
5:272748548..272759742
AA seq 1047 aa
MEISVAPSQGLRPVPDEIQYPHMKFSEWKFKLFKVRSSVKPSPGEAQGPSKNTMEGQSSL
EETPVVICNTNIPAPEKPALVQPTFTANSKSLEKPADIGKAGEKAIHQASLRQLCRICGA
SFRADGQNRRYPVHGPVDSKTQGILRKKEKKVTSWPDLIAKVFKIDVKGDNDSIHPTQFC
HNCWNIMYGRFSNSPHEVYFPRNATIEWHPHTPSCDICQAARWGLKRKGRQSNPSLSKKL
KAMADRARRARLPKSQAQPRKSSKDLMKKLTNCSKMHLSTKCLAVDYPVDFVKAISCQIC
EHILTDPVETTCKHLFCRTCILRCLKVMGSYCPSCQYPCFSTDVESPPRSFVNTLNSLVV
RCPVKDCDKDVSLEKYNQHISSHKEPKESYVYINKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFADKEEGGDLKAVCLTLFLLVLRARNEHRQADELEAIMQGRGSGLQAAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKTLLPGHHPFEWKPTLKNVSARTDVG
IMDGLSGLSASVDDYPVDTIAKRFRYDVALVSALMDMEEDILEGMKSKDLSDYLNGPFTV
VVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMNISIAQGQESVRIFEEAKPNSELCCK
PLCLMLADESDHETLTAILSPLIAEREAMKSSELLLEMGGIQRTFKFIFRGTGYDEKLVR
EVEGLEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYQESAEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKLFQMEIGEVYKNPNASKEERKRWQATL
DKHLRKKMNLKPIMRMNGNFARRLMTKETVEAVCELIHCEERHEALRELMDLYLKMKPVW
RSTCPAKECPESLCQYSFNSQRFAELLSTKFQYRYEGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSG
LIINPQADFEDSLGLDDSQEILDSMEF
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggaaatatctgtggcaccgagtcaaggacttcgcccagtaccagatgaaatccagtac
ccacacatgaaattttctgaatggaaatttaagctcttcaaagtgagatcctctgtgaag
ccctcaccaggagaagctcaggggccatctaagaacacaatggaaggacaatcttctttg
gaggaaactccagtcgtcatatgcaacaccaatattccagcaccagaaaagccagccctg
gtccagccaacattcacagccaattccaagtctttggagaagcctgctgatattgggaag
gccggggagaaggcaatccaccaggccagtcttcggcagctttgccgaatctgtggtgct
tcctttagagctgatggacagaataggagataccccgtccatggtccagtggacagtaaa
actcagggcatcctccgaaagaaggaaaagaaagttacctcctggccagacctgattgcg
aaggtttttaaaattgatgtgaaaggggataatgactccatccatcccacccagttttgt
cacaactgttggaatatcatgtatgggaggttcagcaattccccacatgaggtatacttc
ccgaggaacgctaccatagaatggcacccacacacgccatcctgtgacatctgccaggca
gcccgctggggactcaagaggaaaggccgccagtccaacccatcgctcagcaaaaagctc
aaggccatggctgacagagctcgaagggctcgcctccccaagagtcaagcccagcctcga
aaaagcagcaaggacctgatgaaaaagctaaccaactgtagcaagatgcacctgagcact
aagtgccttgctgtggactaccctgtggactttgtgaaggccatctcatgccagatctgt
gagcacattttgactgaccccgtggaaaccacctgcaaacatttattctgtagaacctgc
attttgaggtgcctcaaggttatgggcagctattgcccctcttgccaatatccctgcttt
tctacagatgtggaaagcccaccgaggtcctttgtgaacaccctcaattccctggtggtg
cgatgccctgtgaaagactgcgacaaggatgtcagccttgaaaaatataaccagcacatc
tcaagccacaaggaacccaaagagtcctatgtgtatatcaataaaggtggccgaccccgg
cagcatcttctgtccctgacccggagggcgcagaaacaccgtctaagagaactgaagctg
caggtcaaggcttttgcagataaagaagaaggaggtgatctgaaggcagtgtgcttgact
ttgttcctgctggtgctgagagctaggaatgagcatcggcaagcagatgagctcgaggcc
atcatgcagggcagaggatcaggcctccaggcagctgtgtgcttggccatccgggtcaac
acttttctgagctgcagccagtaccacaagatgtaccggacggtcaaagccatcactggg
aggcagatcttccaacccttacatgcccttcgaaacgcggagaagactcttctgcctggg
catcacccctttgagtggaagccaactctgaagaatgtctctgctcgcacagacgtaggc
atcatggatggactttctgggttgtctgcttcggtggatgactacccagttgacaccatc
gcaaagaggttccgttacgatgttgccttggtatctgccttgatggacatggaagaagac
atcctagaaggcatgaaatccaaagacttgagtgattacctgaatggtcctttcaccgtg
gtagtgaaagagtcctgtgatgggatgggagatgtgagtgagaagcatgggagtgggcca
gctgtacccgagaaggctgttcgcttttcgttcaccatcatgaatatcagcatcgctcag
ggtcaagagagtgtgaggatatttgaagaagccaagcccaactcggagctgtgttgtaag
cccttgtgcctcatgctggcggatgaatctgaccacgagaccctgacagccatcctgagt
cccctcattgcagagagagaagcgatgaagagcagtgaattactgcttgagatgggaggc
atccaaagaacttttaagttcatcttcaggggaactggctacgatgaaaaacttgtccgg
gaagttgaaggtcttgaggcttctggctctgtctacatttgtaccctctgtgatgccacc
agactggaagcttcccaaaatcttgtttttcactccatcactagaagtcatgctgagaat
ctggagcggtatgaagtctggagatccaacccctaccaagagtcagcagaagagctgagg
gacagggtgaaaggggtctcagcaaagcccttcatcgagacagttccctccatcgatgct
ctccactgtgatattggcaatgcagccgagttttataagctcttccagatggagattggg
gaagtttataagaatcccaatgcatccaaagaggagaggaaacgatggcaggctaccctg
gataagcacctccggaagaaaatgaacttgaaacccataatgaggatgaatggcaacttt
gccaggaggctcatgaccaaggagactgtggaagcggtatgtgaattaattcactgtgag
gagaggcatgaggctttgagagagctcatggacctttacttgaagatgaagcctgtgtgg
cgctcaacctgccctgccaaagagtgtccagaatcactttgccagtatagtttcaattca
cagcgttttgcagaactcctctctaccaagttccagtacagatatgaaggcaaaatcact
aattactttcataagaccctggcccatgtccctgagatcattgagagagatggctccatt
ggagcatgggctagtgaagggaatgaatctggtaataaactcttccgacgcttccggaaa
atgaatgctaggcagtctaagtgctatgagatggaggatgtcctgaaacaccattggttg
tatacctccaaatatcttcagaagttcatgaatgctcataatgccttgaaaaattctggg
ctaatcattaacccacaagcagactttgaagactccctagggctagacgactcacaggaa
attcttgattcgatggaattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (52)   

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