KEGG   Monodelphis domestica (gray short-tailed opossum): 100011650
Entry
100011650         CDS       T01031                                 
Symbol
COL24A1
Name
(RefSeq) collagen type XXIV alpha 1 chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04820  Cytoskeleton in muscle cells
mdo04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100011650 (COL24A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100011650 (COL24A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mdo00536]
    100011650 (COL24A1)
Glycosaminoglycan binding proteins [BR:mdo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100011650 (COL24A1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2
Other DBs
NCBI-GeneID: 100011650
NCBI-ProteinID: XP_007480653
Position
2:41742854..42142376
AA seq 1715 aa
MHLGAHRTRLGKVFPTAITITKAPLLFLALCVIASTGQVQDQGIDVLYQLGLGGNDVRHQ
PVENVLSSSTPLPQGVQVAETGVILTSGTHIEAPTKRILPSSLGQQFTIVIGLLSHRVNN
AFLFSIRNKNRLLFGVQLLPKKVVIHIGGKLVASFNYSVHNEQWHSFAIDIQDSVVSMFV
ECGKKKFSKDILSRMQAFNADSVFTLGSMDYHSVRFEGVICQLDIIPSAEASANYCKYRK
QQCRHVDTYRSEMGFLHTTTFPGIVLEKSPSYKQFDKEVPEEHRTLYEGERNPNSVNKEA
PSVHKLQAPRESSNSLTSVPWGNISSGNHTKPEVQVTKMTAKEHISLNLNLSVTHHQLKK
VLLSSNKKAGLIQNVSENAVGHEKGTTSLPLPKERPSVVSPFMKEDKIDDLKKDLNQHTE
KLMNMSQILNTTLYRATTEPSVENNVYQWKGSKLDTDGTYHTEDNDETDFYDYYYYEDLN
TMLDMENLRGPKGEPGLPGPPGPAGLPGPSGRRGPRGMPGPHGNPGLPGLPGPKGPKGDP
GLSPGQAMVGEKGDPGLLGLIGPPGFQGDKGVKGYPGPPGPRGDQGLPGMAGLAGSPGYP
GRQGLVGPEGNQGPKGVRGFIGSPGMAGQPGPEGERGVPGPRGRKGPKGRQGFPGEFGDR
GPAGPDGNPGIVGGAGPPGFPGLRGAAGPVGANGPSGIPGPMGLPGNMGQPGIKGDKGEQ
GIVGDPGELGYPGDKGAIGLPGPPGMRGKPGPSGQAGDPGPQGPFGPPGPEGFPGDIGIP
GQNGPEGPKGLLGNRGLPGPPGPKGTEGEEGPVGPFGELGPRGKPGRKGYAGEPGPDGLK
GEPGDQGHLGKVGEAGPIGLPGEVGITGSSGEKGERGSPGPVGPPGEKGIMGYPGPPGDP
GPIGPLGLPGHLGTRGLPGLQGPKGQRGPRGLDGLPGEQGMQGIKGEKGDQGKKGLPGLI
GNAGNPGERGAQGKPGLQGTPGSVGDKGPPGEPGARGQQGDAGPIGEMGPEGPPGIEGEP
GPQGEPGAKGDSGPAGSVGGSGEPGIRGEPGTPGEDGLQGKDGAKGIIGDRGPPGEPGDQ
GEAGLPGIIGPLGGPGTIGPPGPEGAVGNPGQRGRPGKKGEKGQLGPIGEIGSTGAPGQM
GEIGPKGARGTRGPVGNLGLMGPEGEPGIPGYGGHQGQPGPPGMPGPKGEKGYPGDDNKV
LGPPGPLGEPGPIGNRGERGESGAEGYKGHVGVPGQRGAIGQQGAPGEPGEMGEPGPKGE
RGSEGPKGKKGAPGPSGKPGIPGLMGPPGQKGEPGYHGAEGILGNSGKVGLPGRPGLPGI
KGNTGRTGMTGPPGTRGAKGSSGMPGNPGAPGPKGEQGLPGHPGKPGRRGHVGMQGNQGP
HGDHGMKGQSGDRGDQGLMGFQGFPGPKGPEGDVGMVGILGPKGPIGQMGNIGHLGREGI
IGPTGKTGPRGEKGHRGEMGPQGPRGHPGPPGPPGAPGPRKQIDINAAIQALIESNTALQ
MESYQNTEVTFLDHSAEIFKTLHYLSNLLHSIKNPLGTRDNPARICRDLLNCERKVSNGK
YWIDPNLGCPSDAIEVFCNFSAGGQTCLSPVSVTKLEFGIGKVQMNFLHLLSSEATHIIT
IHCLNTPIWTSQRTSAPGLPISFKGWNGQVFEENTLLEPKVLTDECKNQDGSWHKAKFLF
HTQDPNQLPVIEVQKLPHLKTGQKHYIESSSVCFL
NT seq 5148 nt   +upstreamnt  +downstreamnt
atgcatttaggagcccacaggacaaggcttggaaaggtcttccccacggcgatcacgatc
acgaaagccccgctcctttttcttgcactatgtgtcatagcaagtactggacaagtccaa
gaccaaggcatagatgttctttatcaactaggccttggaggcaacgatgtaagacaccaa
ccagtggagaatgtactatcttcatctactccattacctcagggagttcaagtagcagag
acaggtgtcattctaacaagtggtactcatattgaggcacctaccaagagaattttgcca
tccagtctaggacagcaattcacaatagtaattggattactgtcacatagagtcaacaat
gcttttctcttcagtatcaggaataaaaatagactgctattcggagtacaattactaccc
aaaaaggtggtgatccacattggtgggaaattggtagcatctttcaattacagtgttcac
aatgaacagtggcactcctttgccattgatattcaagactcagtggtttccatgtttgtt
gagtgtggaaagaagaaattcagcaaagacattctttctagaatgcaggcattcaatgct
gatagtgtgtttactttgggaagtatggactaccattcagtccgctttgaaggagtaatt
tgtcagctggatataattccctcagctgaagcatcagcaaactattgtaaatatcggaaa
cagcaatgtcgccatgttgatacctaccgatcagagatggggtttcttcataccactaca
tttccaggcattgtattggagaagtctccatcatacaagcagtttgataaagaagtacca
gaagaacatagaacactttatgaaggagaaagaaacccaaactcagtaaataaggaggct
ccatcagtccataaacttcaagcaccccgggaatcatcaaattctttaacatctgtccct
tggggaaacatctcttctgggaatcacacaaaacctgaagtccaggtcacaaagatgact
gccaaagaacatatctcactaaatttaaatctgtcagttactcatcatcaactcaaaaag
gtgttgttgagctccaacaagaaagctggcttaatccaaaatgtttcagagaatgctgta
gggcatgaaaaaggaacaactagtctccctttgcctaaagagaggccatccgttgtctct
ccctttatgaaagaagataaaattgatgacctaaaaaaagatcttaatcagcacactgaa
aaactcatgaatatgtcacagattttgaacacaaccttatatcgagcaacaactgaacca
tctgtggagaataatgtctatcagtggaaaggaagcaaattggatactgatggcacatac
cacactgaggataacgatgaaactgacttttatgattattattactatgaggatctgaac
acgatgcttgatatggagaatctgagaggccctaaaggggaacctggactgcctggtcca
ccaggccctgctggtctacctggtccatcaggaaggagaggtccaaggggcatgccagga
ccacatgggaatcccggcttgcctgggctacctggtccaaagggccctaaaggagatcca
ggattatctccaggtcaagccatggttggagaaaagggtgatccaggacttttggggtta
ataggtccccctggttttcaaggcgacaagggtgtcaaaggatatccagggcctcctgga
cctcgaggtgatcagggtcttcctggaatggctggtcttgctggctcgcctggttaccct
ggcaggcaggggttagttggaccagaaggtaaccaaggtcctaaaggtgtaagaggattc
attggctctcctggcatggcgggacaaccaggacctgaaggggaaaggggagttcccggg
ccacgtggaaggaagggtcctaaaggaagacagggctttcctggagaatttggagaccga
ggccctgctggtcctgatgggaaccctggtattgttggtggtgctggccctcctggattt
cctggacttaggggtgctgctggccctgtgggagcaaatggaccttctggaattcctggg
cctatgggtcttccaggaaatatggggcaacctggaatcaaaggtgataagggtgaacaa
ggcattgtgggagatccaggagaactggggtaccctggagacaagggagctatcggtttg
ccaggaccaccagggatgagaggaaagccaggaccttctggacaagcaggtgacccaggc
ccccaaggaccatttgggccaccaggacctgagggttttcctggagatattggcattcct
gggcaaaatggccctgaaggaccaaagggacttctgggtaatcgggggcttccaggacct
cctggtcccaaaggtactgagggagaagaaggaccagttggaccctttggagagctgggt
ccacgaggaaaaccgggtcgaaaaggatatgcaggtgaacctggaccagatggcttgaag
ggagaaccaggagatcaaggacaccttggaaaagttggggaagcaggacctattggttta
ccaggagaagttggtataactggaagctctggtgaaaagggagaacgtgggagcccaggt
ccagttggcccacctggagaaaaaggaattatgggatatccaggacctcctggagatcca
gggcccataggtcctcttggattacctggtcacttgggtacgagagggctgcctgggcta
cagggtccaaagggacaaagggggcctagaggtctagatggccttccgggagagcaagga
atgcaaggtattaagggagaaaaaggcgatcaggggaaaaaaggtcttcctggacttatc
ggtaatgctggaaacccaggagagagaggggctcaaggtaaaccaggtttacaagggact
cctggaagtgtaggagacaagggacctcctggagaaccaggggcacgaggacaacaaggt
gatgctggtcctattggagaaatgggtcctgagggacctccaggcattgagggagagccc
ggtccacaaggagagccaggagccaagggagactctggaccagcaggcagtgttggagga
tctggagaaccaggaataaggggtgaaccaggaactcctggagaagatggtcttcaagga
aaagatggagcaaagggaatcataggagatagaggacctcctggagaacctggggaccaa
ggagaggcaggtttaccaggaattataggacctttgggtggacctggaacaattggccct
ccaggaccagaaggagctgtaggaaatcccggtcaaaggggtcgcccaggaaaaaaggga
gaaaagggacaactgggaccaataggagaaattggaagcacaggtgctcccggccaaatg
ggggaaattggtcctaaaggtgccagaggaaccagaggtcctgtgggaaatttaggatta
atgggacctgaaggagaaccaggaattccaggatatgggggccatcaaggtcaaccagga
cctcctgggatgccagggcctaaaggagaaaagggttatccaggagatgataacaaagtt
ctaggaccaccggggcccctaggtgaaccaggtccaataggcaaccgaggagaaagagga
gaatctggagctgaaggctataagggtcacgtgggtgtgcctggacaaagaggagccatt
gggcaacaaggggccccaggagaaccaggtgaaatgggtgaaccaggacctaaaggagag
agaggatctgaaggtcctaaagggaagaaaggagcacctggtccatctgggaaacctggg
attcctggactcatgggcccacctggacaaaaaggtgagccaggatatcatggagcagaa
ggaatccttggaaactctggaaaagttgggctaccgggaagaccgggacttcctgggatc
aaaggcaacactggaagaacgggaatgactggacctccaggaactagaggagcaaaaggc
tcatcaggcatgccaggaaacccaggagctccaggaccaaagggtgaacaagggctacca
ggtcatcctggaaagccaggtagaagaggtcatgtaggaatgcaaggcaatcaaggaccg
catggagatcatgggatgaaagggcagtctggggaccgtggtgaccaagggttgatgggt
ttccaaggattcccaggtccaaaaggccctgaaggagatgttggcatggttggaatccta
ggccctaaaggtcctattggccaaatgggaaacattggccaccttggtagagaaggcata
ataggtccaacaggaaaaactggacccagaggtgaaaagggccatagaggtgaaatggga
cctcaaggaccaagaggccaccctggaccccctggtcctccgggggcaccaggaccacga
aaacaaatagatatcaatgctgctattcaagccttgattgaatcaaatactgcactacag
atggagagctaccagaataccgaagtgacttttctggaccacagtgcagaaatattcaaa
accctgcactatcttagcaatttactacatagtatcaagaacccacttggcacacgagat
aacccagctcgcatctgtcgggatttgctcaactgtgaacgcaaagtgtcaaatggaaaa
tactggatcgatccaaatcttgggtgcccttcagatgccatcgaggttttctgcaatttc
agtgcaggtggtcaaacatgcttatcacctgtgtctgtaacaaagttggagtttggaatt
gggaaagtccagatgaatttccttcatttactgagctcagaagccacccatatcatcacc
attcattgtctgaacacaccaatatggacaagtcaaaggacaagtgccccaggattgcct
attagtttcaaaggatggaatggccaggtcttcgaagaaaacaccctacttgaaccaaag
gtgcttacagatgaatgcaagaatcaagatggcagctggcataaagcaaaattccttttt
cacactcaggaccctaatcagctcccagtgattgaagtacaaaaacttcctcatctcaaa
acgggacagaaacactacatcgaaagcagttctgtgtgctttctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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