KEGG   Monodelphis domestica (opossum): 100019466Help
Entry
100019466         CDS       T01031                                 

Gene name
RXRA
Definition
(RefSeq) retinoid X receptor alpha
  KO
K08524  retinoid X receptor alpha
Organism
mdo  Monodelphis domestica (opossum)
Pathway
mdo03320  PPAR signaling pathway
mdo04151  PI3K-Akt signaling pathway
mdo04659  Th17 cell differentiation
mdo04919  Thyroid hormone signaling pathway
mdo04920  Adipocytokine signaling pathway
mdo04928  Parathyroid hormone synthesis, secretion and action
mdo04932  Non-alcoholic fatty liver disease (NAFLD)
mdo04976  Bile secretion
mdo05160  Hepatitis C
mdo05200  Pathways in cancer
mdo05202  Transcriptional misregulation in cancer
mdo05216  Thyroid cancer
mdo05222  Small cell lung cancer
mdo05223  Non-small cell lung cancer
mdo05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mdo00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100019466 (RXRA)
 Organismal Systems
  Immune system
   04659 Th17 cell differentiation
    100019466 (RXRA)
  Endocrine system
   04920 Adipocytokine signaling pathway
    100019466 (RXRA)
   03320 PPAR signaling pathway
    100019466 (RXRA)
   04919 Thyroid hormone signaling pathway
    100019466 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    100019466 (RXRA)
  Digestive system
   04976 Bile secretion
    100019466 (RXRA)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100019466 (RXRA)
   05202 Transcriptional misregulation in cancers
    100019466 (RXRA)
   05226 Gastric cancer
    100019466 (RXRA)
   05216 Thyroid cancer
    100019466 (RXRA)
   05222 Small cell lung cancer
    100019466 (RXRA)
   05223 Non-small cell lung cancer
    100019466 (RXRA)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    100019466 (RXRA)
  Infectious diseases
   05160 Hepatitis C
    100019466 (RXRA)
Transcription factors [BR:mdo03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100019466 (RXRA)
Nuclear receptors [BR:mdo03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100019466 (RXRA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4
Motif
Other DBs
NCBI-GeneID: 100019466
NCBI-ProteinID: XP_007475321
Ensembl: ENSMODG00000013136
Position
1
AA seq 467 aa AA seqDB search
MDTKHFLPLDFSTQVNSTSLNSPTGRGSMAAPSLHPSIGPGLGSSLGSSGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt NT seq  +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctggatttttccacccaggtcaattccacgtccctg
aattcccccactggcagagggtccatggcggcaccttccctgcacccgtccattggccca
ggcctcggctcatcgcttggctcgtctggtcagctgcactcacccatcagcaccctcagt
tcccccattaatggcatgggccctcctttctctgtcatcagctcccccatgggacctcac
tcaatgtctgtccccacgactcccacccttgggtttgggacgggcagtccccagctcaac
tcgccaatgaaccctgtcagcagcacagaagatattaagccaccccttgggctcaatgga
gttcttaaagtgcccgcccatccctcaggaactatggcctccttcaccaagcacatatgt
gccatctgtggggaccgctcctcaggtaaacattatggtgtgtacagttgtgaaggctgt
aaaggtttcttcaagaggacagttcgcaaagacctcacctatacctgccgagacaacaaa
gactgcctgattgacaaacgccagcggaaccggtgccaatactgccgctaccagaagtgt
cttgccatgggcatgaaacgagaagctgtgcaagaggagaggcagagggggaaagaccgg
aatgagaacgaggtggagtcaaccagcagcgctaatgaggatatgccagtggagaagatc
ctggaagccgaactcgctgtggagccaaagacagagacttacattgaggcaaacatggga
ctgaatcccaattcacccaacgaccctgttacgaacatatgccaagcagcagataaacag
ctcttcaccttggtggaatgggccaagagaatcccccacttctcagagctccccttggat
gaccaggtcattctattgcgagcgggctggaatgagctgctcatcgcctcgttctctcac
cgctcgatagcagtgaaagatgggatccttcttgccaccggccttcacgtccataggaac
agcgctcacagtgcaggggtgggcgccatctttgacagagtcctgacagaacttgtgtca
aaaatgcgagacatgcagatggacaagacagagctgggctgcctgagagccattgtcctc
ttcaacccggactctaaaggactttccaaccctgcagaagtagaagctctacgagagaaa
gtttacgcttccctcgaagcctactgcaaacacaagtacccggaccagcctggaaggttc
gccaagctcttgctccggctccctgctctccggtccattggcctgaaatgcctggagcac
ctcttcttcttcaagctcataggagatacacccattgacaccttcctgatggagatgttg
gaggctccccaccaaatgacatag

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