KEGG   Monodelphis domestica (gray short-tailed opossum): 100029000
Entry
100029000         CDS       T01031                                 
Symbol
FDFT1
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase 1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo00100  Steroid biosynthesis
mdo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    100029000 (FDFT1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mdo01006]
    100029000 (FDFT1)
Enzymes [BR:mdo01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     100029000 (FDFT1)
Prenyltransferases [BR:mdo01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   100029000 (FDFT1)
SSDB
Motif
Pfam: SQS_PSY DUF1539 GAS
Other DBs
NCBI-GeneID: 100029000
NCBI-ProteinID: XP_001372440
Ensembl: ENSMODG00000012022
UniProt: F7FMA5
Position
1:complement(559757705..559824650)
AA seq 417 aa
MEFVELLGHPEELYNLLWYKMGGARKVIPKLDQDTLSDGLKTCFKYLNQTSRSFAAVIQA
LDSGLRNAVCIFYLVLRALDTVEDDMTISMEKKVTMLKNFHSYLYQPDWSYMESNEKDRQ
VLEDFSTVSLEFRNLEESYQVVIHEICQKMGNGMAEFLEKNVNSIQEWDMYCHYVAGLVG
IGLCRLFLASDLEDPIIGKDLELANSMGLFLQKTNIIRDYLEDTMEGREFWPQEVWSRYA
KKLSDFTKPENIDLAVHCLNELITNALQHIPDILTFLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGKVKIRKGQAVTLMMEATNMPAVKAIMYQYMEEIYQRIPNSDPSSSKTK
QIISSVRKQNFPSCQLVSRNHYSPIYLSCAMLLVALSWQYLSTMSQATEDYVQSGEH
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggagttcgtggagctgctcgggcacccggaggagctctataaccttctatggtacaag
atgggaggtgccaggaaggtgatacccaagttagaccaggacactctcagcgatggcttg
aaaacttgtttcaagtacttgaaccagaccagccgcagctttgcagcagtcatccaggca
cttgatagtggtctgcgcaatgctgtatgcatattttatctggttcttcgagctctggac
actgtggaagatgacatgacaatcagtatggaaaaaaaggtcacaatgttgaaaaatttt
cattcctacttgtaccagccagattggagttacatggaaagcaatgaaaaggatcggcaa
gtcttagaagacttctcaacggtctccttggagtttcgaaacctggaggagagctatcaa
gtggtgattcatgaaatatgtcaaaaaatgggtaatggaatggcagagtttttggaaaag
aacgtgaactccatacaggaatgggatatgtattgtcactatgttgctggactagtggga
attggcctttgtcgtctgttcttggcttcagacttagaagatcccattattggaaaagac
ttggaacttgccaattctatgggtttgttcctacagaagacaaacatcattagagattat
cttgaagatacaatggaagggagagaattttggcctcaagaggtttggagtaggtatgcc
aagaagttgtctgatttcaccaaaccagagaatattgacttggctgtccattgtctcaat
gaactgattactaatgctttacagcacatcccagatatcctcaccttcctttcccgacta
agaaatcaaagtgtgttcaacttttgtgctattccacaggtgatggctattgctactctg
gctgcctgttataataaccagcaagtgttcaagggaaaagtaaagattcggaaagggcaa
gcagtaacacttatgatggaagccaccaacatgccagctgtcaaagctatcatgtaccag
tatatggaggagatttatcaaagaattccaaactcagacccatcttccagcaagacaaag
cagatcatctcctctgtccggaaacagaattttcccagttgtcagctagtctctcggaac
cattattctcccatttacctctcctgtgccatgcttttggttgcattaagctggcaatat
cttagcaccatgtcccaggccacagaagactatgttcagtctggagaacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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