KEGG   Monodelphis domestica (gray short-tailed opossum): 100030148
Entry
100030148         CDS       T01031                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03410  Base excision repair
mdo05166  Human T-cell leukemia virus 1 infection
mdo05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100030148 (POLB)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100030148 (POLB)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100030148 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100030148 (POLB)
Enzymes [BR:mdo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100030148 (POLB)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100030148 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     100030148 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 NTP_transf_2 HHH_2 Cdd1
Other DBs
NCBI-GeneID: 100030148
NCBI-ProteinID: XP_001373104
Ensembl: ENSMODG00000010196
UniProt: F6STA6
Position
1:577871126..577902889
AA seq 335 aa
MSKRKAPQETLNAGITDFLTELANYERNVNQAIHKYNAYRKAASVIAKYPTKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNENKLNHHQRIGLRYFDDFEKRIPREEMLQMQDIVLNEVKKVDPKYIATVCGS
FRRGAESSGDMDILLTHPSFTSESAKQPKLLHQVVEQLQKVHFITDTLSKGDTKFMGVCQ
LSSEDDEDPYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaggagaccctcaacgcgggcatcacggacttcctgaca
gagcttgcaaactatgagaggaatgtgaaccaagcaatccataaatacaatgcttacaga
aaagcagcttcagtaatagccaaatacccaaccaaaataaagagtggagcagaagcaaag
aaactggatggagtaggagcaaaaattgctgagaagattgatgagtttttatctactgga
aaattacgtaaactagaaaagattaggcaggatgatacaagttcatccatcaatttcctg
acacgagttagtggtattgggccatctgctgcaagaaagtttgtagatgaaggaattaaa
acattggaagatcttaggaaaaatgaaaacaaattgaatcatcatcagcgaattggacta
agatattttgatgattttgagaagagaattcccagggaggagatgttgcaaatgcaagac
attgtattgaatgaagttaaaaaagttgatccaaaatatattgccacagtctgtggaagt
ttccgacgaggtgcagagtcaagtggagacatggatattctcctcacccatcctagtttc
acttctgagtcagctaaacagcccaagctattgcatcaagttgttgaacaactacagaaa
gtccacttcatcacagatactttgtcaaaaggggacacaaagtttatgggtgtttgtcag
ctgtcaagtgaggatgatgaagatccatatccatacagaagaattgatatcagattgatt
cccaaggatcagtattattgtggtgttctctactttactggcagcgatattttcaataag
aatatgagggcccatgccctagaaatgggctttacaatcaatgagtatacgatccggcct
ttgggagtcactggagttgctggagaaccccttccagtggacagtgagaaagacatcttt
gactatatccagtggaaataccgagaacccaaggacagaagcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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