KEGG   Monodelphis domestica (opossum): 554233Help
Entry
554233            CDS       T01031                                 

Gene name
BDNF
Definition
brain-derived neurotrophic factor
Orthology
K04355  
brain-derived neurotrophic factor
Organism
mdo  Monodelphis domestica (opossum)
Pathway
MAPK signaling pathway
Neurotrophin signaling pathway
Huntington's disease
Cocaine addiction
Alcoholism
Class
Environmental Information Processing; Signal transduction; MAPK signaling pathway [PATH:mdo04010]
Organismal Systems; Nervous system; Neurotrophin signaling pathway [PATH:mdo04722]
Human Diseases; Neurodegenerative diseases; Huntington's disease [PATH:mdo05016]
Human Diseases; Substance dependence; Cocaine addiction [PATH:mdo05030]
Human Diseases; Substance dependence; Alcoholism [PATH:mdo05034]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
5
AA seq 328 aa AA seqDB search
MCXTTSFLHVFTRLILVSSGNIKSLKKGLHVHTCFGIYPHTCVSQXVRAWTAVVRAFVCD
SVKLSKPIPENGLIKFHQVRRVMTILFLTMVISYFGCMKAAPMKETSVRGQGSLAYPNMR
THGTLESLNGPKAGSRGLTSLADTFEHVIEELLDEDQNVQPREENKDADLYTSRVMLSSQ
VPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDM
SGGTVTVLEKVPVPKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALT
MDNKKRVGWRFIRIDTSCVCTLTIKRGR
NT seq 987 nt NT seq  +upstreamnt  +downstreamnt
atgtgttgaaccaccagcttcctccatgtgttcacaaggttaatccttgttagctcaggg
aacattaagtctctgaaaaaagggttgcatgtccacacatgttttggcatctacccacac
acttgtgtaagtcagtaagtcagagcctggacagccgtggtgcgtgcgttcgtttgtgat
tcagtgaaactgagcaaaccgattccagaaaatggtctcataaagttccaccaggtgaga
agagtgatgaccatccttttccttactatggttatttcatacttcggttgcatgaaggct
gccccgatgaaagaaaccagtgtccgaggacaaggcagcttggcctacccgaatatgcgg
acccacggaactctggagagtctaaatgggcccaaggcaggttcaaggggactgacatca
ttggctgacacttttgaacatgtgatagaagagcttctggatgaggaccagaacgttcag
ccgagggaagagaataaggatgccgacttatacacatctagggtcatgctcagcagtcaa
gtgcctttggaaccccccctgctctttctccttgaggaatacaaaaattacctggatgcg
gcaaacatgtccatgagggtccgtcgccattctgaccctgcccgtcgaggggagctgagc
gtgtgtgacagtattagcgagtgggtcacagcggcggataaaaagactgcagtggacatg
tcgggggggacggtcacagtccttgaaaaggtcccagtccccaaaggccaactgaagcaa
tatttctacgagaccaagtgtaatcccatgggttatacaaaagaaggttgcagaggcata
gacaaaaggcattggaactcccagtgtcgaactacccagtcttacgtgcgagcgctcacc
atggataataaaaagagagtcggttggaggttcatcagaatagacacttcctgtgtatgt
acactgactattaaaaggggaagatag

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