KEGG   Methanobrevibacter sp. AbM4: Abm4_0126
Entry
Abm4_0126         CDS       T02687                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
meb  Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:meb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:meb03016]
    Abm4_0126 (truD)
Enzymes [BR:meb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Abm4_0126 (truD)
Transfer RNA biogenesis [BR:meb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Abm4_0126 (truD)
 Prokaryotic type
    Abm4_0126 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 15797621
NCBI-ProteinID: AGN16046
UniProt: R9SIW2
Position
169727..171010
AA seq 427 aa
MLNANTYVTDDPGIGGTIRNSYEDFYVEEIPEIEPTGEGPNIWIWIEKVGRTTLDVLLDI
ARDLHISRKRMGFAGMKDKKALTRQWICISNMESDEKLNEVLALRDTIHNTKFLKVVRGR
KKLRMGQLKGNKFRIKIKDIPFNDDITSFEDASNRAKEILGQLEITGVPNYFGWQRFGKP
RTSTHLVGEALIQNDLKKAVDLYIGHPCMEESPDSIKARQAYDDGNMEESLELMHGGMRY
EKMMLRQLIHDYNKFAHLDDKSYKSALLALPKPLQRMFVHAYQSYLFNDVVSRRVEMGIN
SYVEGDIIIDDDEAIIRDKSPEEYDRLIKEFKANPTCPLYGTKVPFAGAKVGEMEREVLD
KYGLKKEDFECPKMPKLGSHGLRRSMRFRVWDTHAEACDDGIIVEFSINKGSYATAVLRE
IMKVDVV
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcttaatgcaaatacatatgttacagatgatccaggtattggcggaactattagaaat
tcctatgaggacttctatgttgaggagatacctgagatagagcctactggtgagggaccc
aatatttggatatggattgagaaggtcggaagaacaacattggatgttttgttggatatt
gcaagagatttacatataagccgtaaacgtatgggttttgcaggaatgaaggataaaaag
gctttaacccgtcagtggatatgtatatccaatatggaatccgatgagaaactcaatgag
gtcttggctttaagggataccatccataacaccaaatttttaaaggttgtaaggggacgt
aaaaagcttagaatgggacagttgaagggcaataagttcagaatcaagatcaaggatatt
ccattcaatgatgacatcacatctttcgaggatgcctcaaacagggccaaggaaatttta
ggtcaattggagatcacaggagttccaaactatttcggatggcagaggttcggaaaacct
agaacatcaacacatcttgtaggtgaggcacttatccagaatgatcttaaaaaggctgtg
gatctatatataggccatccatgtatggaggaatcaccggacagcattaaggcaagacag
gcatacgacgatggcaatatggaggaatcactggaattgatgcatggtggaatgcgctat
gagaagatgatgctaaggcagcttatccatgactataataagttcgcccaccttgatgat
aaatcatataaaagcgcattgcttgcccttccaaagcctcttcagagaatgtttgtacat
gcataccaatcatatctctttaatgatgtcgtatccagaagggttgagatgggtattaat
tcatatgttgaaggggacatcataatagatgatgatgaggccatcataagggataaaagt
cctgaggaatatgataggttaattaaggagttcaaggcaaatccgacctgtccactatat
ggtaccaaggttccctttgcaggtgctaaggtaggtgaaatggaaagggaagttttagat
aaatatggccttaaaaaggaagacttcgaatgtccgaagatgcctaaattgggaagtcat
ggtttgagacgttccatgaggtttagggtatgggacactcatgcggaagcctgtgatgat
ggaattattgtggagttttcaattaataaaggctcatatgcaactgcagttttacgtgag
attatgaaggttgacgttgtctag

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