KEGG T02056: Q7C

Methylophaga sp. JAM7: Q7C_1132

Entry

Q7C_1132 CDS T02056

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

mec Methylophaga sp. JAM7

Pathway

mec03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:mec03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 Viral_helicase1 AAA_19 AAA_11 Helicase_RecD DUF2075 AAA_22 PhoH UvrD-helicase AAA AAA_5 TIP49 PIF1 AAA_25 Herpes_Helicase AAA_16 AAA_14 NTPase_1 Zeta_toxin

Other DBs

NCBI-GI:

387130084

NCBI-GeneID:

12843468

UniProt:

I1YH94

Position

complement(1160601..1162340)

AA seq 579 aa
MFRALSLLRQCGFSEIACQFADFIERKTQGEPLTTSLTAGLLTEAVSQGHVCLNLHQVPA
VTKGVSDYLPEQVATWTEILKTSRVVGEPGEYRPLILTDAGQVYLYRFWLDERDVASLIR
LRLKPVENVDFTQLNQDLINWKSHTVGTDWQKVAVAMAVSRQFGVISGGPGTGKTSIVLK
ILQCLEQQSNSLQIGLAAPTGKAAARLQQAIRQPGYEVKTLHRLLGITEQNHFGRYNHKR
TLPLDVLIIDEASMIDISLMAKLMRAMSEQTRLILLGDSQQLASVESGAVLANLSEGQQG
VFSDTFIEQFSCLGLEKASSNTPELLIDSFVRLKHSYRFSDESAIGKLSQLINQGDSGSV
INILTLPDSDISWRQTTSDDIHEVVTAGYQAYIETVENQASHEKILHAFERYRVLSALRQ
GPQSVASINQMMSRYLGRRGWRAADSYYVGRPILITQNQYRQQLFNGDIGIVLPDETGQL
KACFKVAETFQWVSLNRLPAHETVFAMTIHKSQGSEFDEVSVLLPDEFSPVLNRELLYTA
LTRAREKVAFLSSELTLRQTIETRHHRESGLSEQLGING

NT seq 1740 nt +upstreamnt +downstreamnt
atgtttagggcgctcagcttattacgccaatgtgggtttagtgagattgcttgtcaattt
gctgattttatcgaacgtaaaacacaaggtgaaccactcacgaccagtttgacggcagga
ttattaaccgaggcggtttcccaaggccatgtttgtctgaatttgcaccaggtacctgct
gtgaccaaaggggtatccgattatttgcctgaacaggtcgctacctggactgagatatta
aaaaccagtcgtgtggttggggagccgggagagtatagaccgctgattttgacagatgct
ggccaggtttatttatatcgattttggttggatgagcgtgatgttgcctcacttattagg
cttcggctcaagccagttgaaaacgttgatttcacgcaactgaatcaagatttaatcaac
tggaagtcacataccgttggtactgactggcaaaaagtcgcagtggctatggcggttagt
cgccaatttggggtgatttccggtgggccaggtacaggaaaaacctcgatcgtattaaag
attttgcagtgtctcgagcagcaatccaattcacttcaaattggtcttgcggccccaaca
ggtaaagcagcagcacgacttcagcaggctattcgtcaaccaggttatgaggttaaaaca
ttacatcggctactcggtataacggaacagaatcactttggtcgctataaccataagcga
acattgcctttagatgtcctcattattgatgaggcatccatgattgacattagcctgatg
gcaaaattgatgcgtgcaatgtctgaacaaacgcggcttattttgctgggtgatagtcaa
cagcttgcctctgtggagtctggtgctgttttagccaatctcagtgaggggcagcaaggt
gttttttcagatactttcattgagcaattttcttgtcttggccttgaaaaagcttcatca
aacacgcccgaattgcttatagatagttttgtcagactgaaacatagctaccgattttct
gatgaaagtgcgattggcaagctgtcccagctaattaatcaaggcgacagtggctcggtt
atcaatattctgacacttcctgattcagatatatcatggcggcaaaccacgtcggatgat
attcatgaagtcgtgactgccggttatcaggcttatattgagacggttgaaaaccaagca
tcacacgagaaaatactccatgcttttgaacgttatcgcgtgttatctgcgctacgccaa
gggccacagtctgttgcaagcattaatcaaatgatgagccgttatttgggacggcgagga
tggcgggctgcggactcgtattatgtcggaaggccaattttaataacccagaatcagtat
cggcaacagttgtttaatggggatattgggatcgttttacctgacgagacaggtcaactc
aaagcctgttttaaagtggcggagacatttcaatgggttagtttgaacagattacctgct
cacgagaccgttttcgctatgaccattcataaaagtcagggctcggagtttgatgaggtg
tctgtactgttacctgatgagtttagccctgttttgaatcgtgaattgctctacacggcg
ctaacacgggcgcgggagaaagtggcctttttgagcagcgagctgacgttgagacaaaca
atcgaaacccgtcatcatcgcgaaagcggcctatccgaacagttagggattaatggctag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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