KEGG   Methylophaga frappieri: Q7C_1192Help
Entry
Q7C_1192          CDS       T02056                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mec  Methylophaga frappieri
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mec00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Q7C_1192
Enzymes [BR:mec01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Q7C_1192
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Q7C_1192
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1220915..1221733
Genome map
AA seq 272 aa AA seqDB search
MPELPEVETTRVGIAPHIEGQIIERVIVRDYRLRWPIPADIEKILTGQQILQVQRRAKYL
LFKTPTGTLIMHLGMSGRMRVVDTPVKPAKHDHVDITFRNGLTLRFTDPRRFGAMLWTTT
STDLHPLIHHLGPEPLSEDFTGDSLYQRSRKRQVSIKTFIMNAEIVVGVGNIYASEACFL
ARLHPEMKAGKLTRPQAERLATAIKTVLEKAIAAGGTTLRDFRDAAGNPGYFAQKLFVYA
RANQPCRHCDQIIVQCRQANRATFFCPGCQKG
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagttgaaactacccgagttggtattgccccccatattgagggc
caaatcattgaacgggttattgttcgggattatcgtttgcgctggccgatacctgcagat
atagaaaaaatattgactggacagcagatccttcaggtacaaaggcgtgcaaaatacctg
ttattcaaaaccccgactggcaccttgatcatgcatttgggtatgtcgggccgtatgcgt
gttgtagatacgcccgtcaaaccggcgaagcatgaccatgtggatatcacatttcgtaat
ggactgacgctacgttttactgatccacgtcgttttggtgccatgttgtggacaacgacg
tcaacggatttacacccattaattcatcatttagggccagaaccgctctctgaagacttc
actggtgactccctgtaccagcgcagtcgaaagcgccaagtgagcattaaaacctttatt
atgaacgcagaaattgtggtcggtgtcggcaatatttacgcaagtgaagcctgctttttg
gctcgccttcatcctgaaatgaaagcgggaaaattaacgcgtcctcaagccgagaggctg
gcaacagcaattaaaaccgtgctggaaaaagccattgccgctggcggcaccaccttaaga
gactttcgagacgctgccggtaatccaggctattttgcccagaagctttttgtctatgcc
cgcgctaaccagccttgcagacactgtgatcaaatcattgttcagtgtcgtcaggccaac
cgcgccacgtttttttgtccaggctgtcaaaaaggctag

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