KEGG   Methylophaga frappieri: Q7C_1935
Entry
Q7C_1935          CDS       T02056                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mec  Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:mec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mec03032]
    Q7C_1935
   03400 DNA repair and recombination proteins [BR:mec03400]
    Q7C_1935
Enzymes [BR:mec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Q7C_1935
DNA replication proteins [BR:mec03032]
 Prokaryotic type
  DNA Topoisomerases
   Q7C_1935
DNA repair and recombination proteins [BR:mec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Q7C_1935
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 Toprim_2 Auto_anti-p27
Other DBs
NCBI-ProteinID: AFJ03076
UniProt: I1YJI3
Position
complement(1951267..1953549)
AA seq 760 aa
MGNKLVIVESPAKAKTIKKYLGNNVEVLASYGHVRDLLPKEGAVDPENDFAMKYQVIDRN
SKHVDAIAKALKKADSLYLATDPDREGEAISWHLYELLKKKGALKDKTTHRVVFHEITKQ
AVNDAVANPRELSMDLVNAQQARRALDYLVGFTLSPLLWKKVRRGLSAGRVQSPALRMIV
ERELEIEAFKAQEYWTIEADAQTSGSAFQAKLTHYQGEKLSQFSIDNTEQAESVVSKLNQ
AADGKLLVTNVEKKQRKRNPAAPFTTSTLQQEASRKLGFGAQRTMSVAQQLYEGVDTGEG
AVGLITYMRTDSVTLAAEAVSEVRELISERYGAKAVPAKPQEYKTKSKNAQEAHEAIRPT
SALRTPEEMKAYLSVDQLKLYTLVWQRTVASQMIHATLNTVAVDLGCGQGNTFRANGSTV
VNPGFMQVYLEGQDDKKADKDENLLPAMEKGEVVSLDKIRPEQHFTEPPPRYSEASLVRS
LEEHDIGRPSTYASIISTLLQREYVELINKRFHPTDVGRVVGKFLVDHFTRYVDYSFTAK
LEDELDAVSRGEEEWIPLLRSFWGPFKSQVETKDKSVQRSDVTQELLDENCPKCGKQLSS
RLGRSGRFIGCTGYPDCDYTRNMDGEETTASEPEKVEGRQCPKCDSDLIFRTGRYGKFIG
CSSYPKCKHIESLEQPTNTGVDCPQCKKGEILTRKSRRGKVFYSCSEYPKCDYALWNEPL
NEACPNCEWPILTLKTTKSKGTEKVCPQKDCGFSEKVESV
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgggaaataaactggttattgtcgagtcgcctgccaaggccaagaccatcaaaaaatac
ctgggcaacaatgtcgaggtcctggcttcctatggccatgttcgtgacttgcttccaaaa
gaaggggcggtcgatccagaaaatgatttcgccatgaaataccaggtgattgaccggaat
agcaagcatgttgatgccattgccaaagcgttgaaaaaagccgattctctctacttggcg
acggatcctgatcgtgaaggagaggccatttcctggcacttgtatgagctgctcaagaag
aaaggggcactcaaagacaaaaccacacaccgagttgtttttcatgaaataaccaagcaa
gcggtcaacgatgccgttgccaatccgcgcgagctatcgatggatttggttaatgcgcag
caggccagaagggcgttagattatttagttggatttaccttgtcccccctgttgtggaag
aaagtccgacgcggcttatcagcaggtcgggtgcaaagtccggcactgcgcatgattgtt
gagcgagagctggaaattgaagctttcaaggcacaagaatattggacgattgaagccgat
gctcagacgagtggttccgcatttcaagccaagctgacgcattatcaaggtgagaaatta
tcgcaattcagcattgataataccgagcaggcagagtccgttgtcagtaagttaaatcaa
gcagctgatggcaagctactggttactaatgttgagaaaaaacagcgtaaacgtaacccg
gcagcgccctttaccacctccacattacaacaggaagcgtcccgtaaactcggctttggc
gcacagcgaacgatgagtgttgcacagcagctatatgagggtgtcgacactggtgagggc
gcggtaggtctaataacctacatgcgtacagactcagtcacattggcggccgaagcggtc
tcagaagtgcgtgaactgataagtgaacgctatggtgccaaagccgtcccggcaaagcct
caagaatacaaaaccaaatcaaaaaatgcgcaagaggcgcacgaagccattcggccgact
tccgctttacgaacacctgaagaaatgaaagcgtatttgtcggtggatcagttgaagctc
tataccttggtttggcaacgtacggtcgccagtcaaatgattcatgcgacgcttaatact
gttgcggtggacttggggtgtgggcagggtaatactttccgtgccaacggctcgacggtt
gttaatcctggctttatgcaagtttacctggaaggtcaggacgacaaaaaagcggataaa
gacgagaatctgctgccagcaatggagaaaggtgaggtagtcagcctagacaaaattcgc
ccagaacagcatttcactgagccaccaccccgctacagtgaagcgagtcttgttcggagt
ttagaagagcatgatattggtcgcccctcaacctatgccagtattatctcgaccttatta
cagcgtgagtatgtcgaactcatcaacaagcggtttcacccgactgatgtcggacgggtt
gtgggtaagtttctggtcgatcactttacccgctacgtggattacagttttaccgccaaa
cttgaagatgaacttgacgccgtctctcgcggcgaagaagagtggatcccgctgctgcgt
agcttttgggggccgttcaaaagtcaggttgaaaccaaggataaatcagtccaacgcagt
gacgtcacgcaggagctgctggacgaaaactgtccaaagtgtggtaagcagctatccagt
cgtctgggtcggagtggccgctttatcggctgtaccggttatccggattgtgattacacc
cgaaacatggatggagaagaaacgacagccagcgagcccgagaaggtcgaaggtcgtcaa
tgtccgaaatgtgattcggatttaatcttccgaaccggccgctatggcaaatttattggt
tgcagcagttatccaaaatgtaagcatattgagtctctggagcagccgactaacaccggg
gttgattgcccgcaatgtaagaaaggcgaaatcctgacgcgtaaatcccggcgcggcaaa
gtgttttactcttgttcggaatacccaaaatgtgactatgcgctatggaacgagccgctg
aatgaggcgtgtccaaactgtgaatggcccatcctgaccttaaagacaacaaagagcaaa
gggactgaaaaggtctgcccacaaaaagactgtggttttagtgaaaaggtagagtctgtc
tag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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