KEGG   Methylophaga sp. JAM7: Q7C_2001Help
Entry
Q7C_2001          CDS       T02056                                 
Definition
DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
mec  Methylophaga sp. JAM7
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mec03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mec03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mec03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2012352..2013125
Genome map
AA seq 257 aa AA seqDB search
MQLASVYQPETAAPVSAYLISEKYDGVRAIWTGTQLLTRNGNVINAPDWFTDPLPDVWLD
GELWTTHQDFARLSGIVRTQIPDDAEWQQVSYRVFDMPDSTLPFELRYQHYTQLITQLNS
AHIKPVQQVRVQSQAALQSLLKDKLATGAEGLMLHLATAKHRGGRTRAVLKLKPYEDAEA
VVIGHLPGKGKYINQLGALRVKNEQGQIFAIGSGLSDQDRASPPPIGTIITYRYQGYTKT
GLPRFARFIRIREPDPD
NT seq 774 nt NT seq  +upstreamnt  +downstreamnt
gtgcagctggccagcgtctatcagccagagacggcagcgccagtttctgcctatctgatt
agtgaaaagtatgatggtgtcagagcgatttggacgggaacccaactcttaacccgaaac
ggcaacgtcattaacgccccagactggtttaccgatcccctgcccgatgtttggctggat
ggcgagttatggacaacccatcaagactttgcccggttaagcggcattgtcagaacccaa
ataccggatgatgccgaatggcagcaggtgagttatcgggtattcgatatgccggacagc
acattgccgtttgaactacgctatcaacactacacacaactcatcacgcagctgaattcg
gcacatattaaacccgttcaacaagttcgggttcagagtcaggcggccctgcaaagtttg
ttaaaagacaaactggcaacgggcgcagaagggctcatgttgcacctcgccacggcgaag
catcggggtggacggacaagagctgtgctcaaattaaaaccctatgaagatgccgaagcc
gtggtaattggccacctgcccggcaaaggcaaatacatcaaccaactcggtgccttacgc
gtcaagaatgagcaaggccaaatctttgctattggcagcggcttatcggatcaagatcgc
gcctctcccccacccattggcaccatcatcacctatcgttatcaaggctataccaaaacg
ggtttaccacgctttgccagatttatacgtattcgcgaaccagatcctgattag
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