KEGG   Methylophaga frappieri: Q7C_2234
Entry
Q7C_2234          CDS       T02056                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mec  Methylophaga frappieri
Pathway
mec03030  DNA replication
mec03410  Base excision repair
mec03420  Nucleotide excision repair
mec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q7C_2234
   03410 Base excision repair
    Q7C_2234
   03420 Nucleotide excision repair
    Q7C_2234
   03440 Homologous recombination
    Q7C_2234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mec03032]
    Q7C_2234
   03400 DNA repair and recombination proteins [BR:mec03400]
    Q7C_2234
Enzymes [BR:mec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q7C_2234
DNA replication proteins [BR:mec03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Q7C_2234
DNA repair and recombination proteins [BR:mec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Q7C_2234
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Q7C_2234
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Phasin_2 Phi-29_GP3 HHH_5
Other DBs
NCBI-ProteinID: AFJ03370
UniProt: I1YKC7
Position
complement(2224099..2226813)
AA seq 904 aa
MTQSTAPLILVDGSSYLYRAYHAMPPLTNSAGEATGTIYGVVNMLRKLIKDYQPSRMAVV
FDAKGKTFRHDLYSEYKATRPPMPDDLREQVTPIHDIVTAMGLPLLVIDGVEADDVIGTL
ARQATQNGIETVISTGDKDMAQLVSEHVTLVNTMNNTKTDIAAVKEKFGLKPDQIIDYLA
LMGDKVDNIPGVESVGPKTASKLLNQYHSLQGVIENANEVKGKLGEKLRAALQDLPRSYD
LATIKLDVDLPVDLDTLAIKQPDLKALSTLFEQYEFKTWRQEITSESSANAMTTNTPESS
QKTDYQVITSEKHLSEWLERLKKADLFAFDTETTSLNYLEARLVGLSFAIHPGEAAYLPL
AHDYPGAPDQLDFDQTLATLKPILEDARILKLGQNLKYDRHVLLNHNIDLQGIAHDTMLQ
SYVLDSTATRHDMDSLAEKYLGQKTIHFEDIAGKGKKQLTFNQIALEQAVPYACEDADIT
MQLHQQLWPKIQAIPSLKTVYRELEMPLLPVLNTLERNGVHIDIFMLQQQSDTLAHDIVQ
LEKQAHELAEQPFNLGSPKQLQEILYEKQGLPVLKKTPKGQPSTAENVLQDLADQDYPLP
KVIMQYRSLSKLKSTYTDKLPQQVNQQTGRIHTSYHQAVTATGRLSSSDPNLQNIPIRTE
TGRRIREAFVPESEYKLLAADYSQIELRIMAHLSSDQSLLTAFSQGEDIHRHTASEIFAV
AAQDVTSDQRRSAKAINFGLIYGMSAHGLSVQLGIERHQAASYMETYFERYPGVRDYMNH
TREQAKKDGYVETIFGRRLYLPEINSSNGLRRQYAERTAINAPMQGSAADIIKRAMIAIH
HWLSESDTGIRMIMQVHDELVFEVPETQVELAQREIEKFMTQAAALKVPLEVGVGIGDSW
EQAH
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgacccaatctaccgctccgctgattctcgtcgatggatcttcttacctttatcgcgcc
tatcatgcgatgccgccattgaccaacagtgccggcgaggcaacagggacaatctatggc
gtcgtaaacatgctgcgtaaactcattaaggattatcagccttcacgaatggcggtggtt
tttgatgccaaaggcaaaaccttccgccatgacttatacagcgagtacaaagcgacccgc
ccgcccatgccggatgatctgcgtgaacaagttacaccaatacacgacatcgtcaccgcg
atgggcttaccgctgctcgttattgatggtgttgaagccgatgacgtcatcggtacgctt
gccaggcaagcgacgcaaaacggtattgaaacagttatttcaactggcgataaagatatg
gcgcaactggtcagcgagcacgtgacgctggtcaacaccatgaacaatacgaaaaccgat
attgccgctgtcaaagaaaagtttggcttaaaaccagatcagatcatcgattacctcgcc
ttaatgggcgataaagtggacaacattccgggggttgaaagcgtcggcccaaaaacagcc
agtaaattgctcaatcaatatcacagcctgcaaggcgttattgagaacgccaatgaggta
aaaggtaaattaggtgaaaagctccgtgccgccttacaagatttaccacgctcttatgat
ctggcgacgattaagctggatgtcgatttgcccgtcgacctcgatacactggcgataaaa
caaccggatttaaaggcgctgtcaacattatttgaacagtatgaatttaaaacctggcgg
caagaaatcacctcggagagttcggccaatgcgatgacgacaaacacccccgaatcatcc
caaaaaaccgattatcaggttattaccagcgaaaaacacttgtctgaatggcttgagcga
ctgaaaaaagcggacctgtttgcctttgatacagaaaccaccagcctgaattatctggaa
gcgcgacttgttggcctgtcctttgccattcatcccggtgaagcggcttatttgccgtta
gctcatgattatcccggggcaccggatcagctggactttgatcagacattagcaacgtta
aaacccattttggaagatgcgcgcatcctcaaactggggcagaatctgaaatacgatcgg
catgtattacttaatcataatatcgacttgcaaggcattgctcacgacaccatgctgcaa
tcgtatgtccttgatagtacggcaacccgacatgatatggactcgcttgccgaaaaatat
ttaggccaaaagaccattcactttgaggatatcgcaggcaagggtaaaaaacagctcact
tttaatcagattgctttggagcaggcggtaccctatgcctgtgaagatgccgacattacc
atgcaacttcaccagcaactgtggccgaagatacaagctattccctcactgaaaaccgtt
taccgtgaactcgaaatgccgcttctgcctgttttaaacacactggaacgcaatggcgtg
catattgatattttcatgttgcaacaacaaagcgatacgctggcacatgacatcgtacaa
ttagaaaagcaggctcacgaacttgctgagcagccctttaacttgggttcaccgaaacaa
ttacaagaaattctttacgaaaaacagggtctgcctgttctgaaaaaaacccccaaaggt
caaccgtcaacggctgagaatgtgctgcaggatctcgccgatcaagactatccattacct
aaagtcatcatgcagtaccgcagtctgagtaagctcaagtcaacctataccgacaagctg
ccgcaacaggttaatcagcaaaccggtcgtattcatacctcctatcatcaagcggtgacg
gcgacaggtcgactttcgtcgtctgatcctaatttgcaaaatattcctattcgaacagaa
acgggccggcgtattcgtgaagcctttgtacccgagtctgaatacaaattgctggccgcc
gattactcgcaaattgaactgcgcatcatggcgcatttatcaagtgaccagagtttgctg
actgctttttcgcaaggtgaagatattcatcggcatactgcttcagaaattttcgccgtg
gcagcgcaagacgtcacaagtgatcaacgacgcagtgccaaagccattaactttggttta
atttatggcatgtctgcacatggtttgtctgttcagcttggtatcgagcgtcatcaggct
gccagttacatggagacctattttgagcgttatcccggcgtacgtgattatatgaatcac
acccgtgaacaagccaaaaaagatggctatgttgagaccatttttggccggcgtttatat
ttgcccgaaattaattccagtaatggtttacgacgtcagtatgcagaacgcacagcgatt
aatgcgccaatgcaaggtagtgccgcagacattattaaacgcgccatgatcgctatccat
cattggctgagtgagtccgacaccggtatccgaatgattatgcaagtacacgatgaactg
gtttttgaggttccggagacgcaggttgaactggcgcagcgcgaaatcgaaaaatttatg
actcaggcagcagcgttaaaagtcccgctagaagttggtgtgggtatcggtgatagctgg
gaacaagcgcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system