KEGG   Methylophaga frappieri: Q7C_2432
Entry
Q7C_2432          CDS       T02056                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
mec  Methylophaga frappieri
Pathway
mec02024  Quorum sensing
mec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Q7C_2432
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q7C_2432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mec03019]
    Q7C_2432
   03036 Chromosome and associated proteins [BR:mec03036]
    Q7C_2432
Messenger RNA biogenesis [BR:mec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Q7C_2432
Chromosome and associated proteins [BR:mec03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Q7C_2432
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AFJ03557
UniProt: I1YKW4
Position
2422709..2422933
AA seq 74 aa
MAKAQSLQDPFLNALRRENVPVSIYLVNGIKLQGQIDSFDQFVILLKNSVNQMVYKHAIS
TIVPARNVTLPAEE
NT seq 225 nt   +upstreamnt  +downstreamnt
atggccaaagcccaatctttacaggatcctttcttaaacgcccttcgacgtgaaaatgtg
cccgtttccatttatctggtaaatggcattaaactgcaagggcaaattgactcatttgat
cagtttgtcattttattgaaaaactctgtcaatcagatggtctacaagcacgctatttcg
actattgtccctgctcgtaatgtcacgctgcctgctgaggaataa

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