KEGG   Methanosarcina sp. WH1: MSWH1_2025
Entry
MSWH1_2025        CDS       T03851                                 
Name
(GenBank) tRNA cytosine methylase Pos56
  KO
K07254  tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
Organism
mef  Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:mef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mef03016]
    MSWH1_2025
Enzymes [BR:mef01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.206  tRNA (cytidine56-2'-O)-methyltransferase
     MSWH1_2025
Transfer RNA biogenesis [BR:mef03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    MSWH1_2025
SSDB
Motif
Pfam: Trm56
Other DBs
NCBI-ProteinID: AKB22296
UniProt: A0A0E3L4X8
Position
complement(2482260..2482793)
AA seq 177 aa
MKRIVLLRLGHRPERDKRITTHVGLTARMLGAEGMLLASDDPGIVQTLEDVVRRWGGHFY
IKNNVSFKQEIRNWKEEGGKVCHLSMYGINLPDVTDELKKCEKLMIVVGAEKVPPEIYQL
ADWNVAVGSQPHSEVAAVAITMDRIAEGEPLEKEFSDAELTIIPAERGKHVIENIRD
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaagagaattgtattactgcgcctggggcatcgccctgagagggataagagaattacc
acccatgttggtttaactgccaggatgctgggagctgaaggcatgcttcttgcttctgat
gacccggggattgtgcagactcttgaagatgtggtcaggcgctggggtgggcatttttac
attaaaaataacgttagtttcaagcaggaaatcagaaactggaaagaagaaggtggaaaa
gtctgccacctttccatgtacgggatcaacctgccagatgttactgacgaactcaaaaag
tgcgaaaagctcatgatcgttgtaggtgcagaaaaagtcccccccgaaatttaccagctc
gccgactggaacgtagctgtgggcagccagccccattcagaagttgcggcagttgcaatc
acaatggataggatcgccgagggtgagccgcttgaaaaagagttttcagatgccgaactg
acaattattcccgcagaaagaggcaaacacgttatagaaaacatcagggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system