KEGG   Methylovorus glucosetrophus: Msip34_2003Help
Entry
Msip34_2003       CDS       T00943                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mei  Methylovorus glucosetrophus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mei00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Msip34_2003
Enzymes [BR:mei01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Msip34_2003
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Msip34_2003
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2132355..2133173)
Genome map
AA seq 272 aa AA seqDB search
MPELPEVETTMRGLAPLVGQPVAKVVIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYIL
AQFDTGYLMLHLGMSGRICLLAQDEPAAKHDHFDLHFADGQVLRLRDPRRFGAVLWAGAE
PEQHALLSVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGVGNIYASESLFRA
RIHPQTPANQLSRQACDRLAAEIKATLTDALAAGGSSLRDFFGADGNPGYFQQEYFTYAR
TGEACKICSTPIQNVRLGQRSTFFCPRCQPKP
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactaccggaggtcgaaactaccatgcggggcctggccccgctggtcggccag
ccggtagccaaggttgtcatccgtcatcccacgctgcgttggcccatcccggccgatctg
gtgcatacccttccgcagcagaccctgaaatcgctgacgcgtcgagccaaatacattctg
gcgcaatttgataccggttatctcatgctgcatcttggcatgtcgggccgcatctgtctg
ctcgcgcaggatgagcctgccgccaagcatgatcactttgacctgcattttgccgatggc
caggtgctgcggttgcgggatccgcggcgttttggggcagtgctatgggcgggtgcggag
cctgagcagcatgccctgttaagtgtgctggggccggagccgctggaatccgcctttgat
ggcgactggctgtatcgccagtttcgcacgcgcagtgccccggttaaaaatgccatcatg
gatagtcatctggtagtcggcgtgggcaatatctacgccagtgaatcgctgtttcgcgcg
cgcatacatccgcaaacgcctgccaaccagctgagtcggcaggcatgtgaccgactggcc
gcggagatcaaggctaccctgaccgatgcgctggcagccggaggcagcagcctgcgtgat
ttctttggcgcagatggtaatccggggtattttcagcaggagtacttcacttacgcccgc
acaggcgaggcctgcaagatatgcagcacgcctatccagaacgtgcggctggggcagcgc
tcgactttcttctgcccgcgctgccagcccaaaccctag

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