KEGG   Methylovorus glucosetrophus: Msip34_2321
Entry
Msip34_2321       CDS       T00943                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mei  Methylovorus glucosetrophus
Pathway
mei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Msip34_2321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mei03021]
    Msip34_2321
   03019 Messenger RNA biogenesis [BR:mei03019]
    Msip34_2321
Transcription machinery [BR:mei03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Msip34_2321
Messenger RNA biogenesis [BR:mei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Msip34_2321
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 NACHT AAA AAA_22 ResIII
Other DBs
NCBI-ProteinID: ACT51563
UniProt: C6XA22
Position
2447496..2448755
AA seq 419 aa
MHLSDLKHLPVTELVEMAIANEIEGASRMRKQDLIFALLKNKAKKGDSIFGDGTLEVLQD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIMGEIRTPKDGERYFALVKVDSVN
GEAPENTKHKILFENLTPLFPTKPLVLERDIRGEENVTGRVIDMIAPIGKGQRALLVAPP
KSGKTVMMQHIAHAITANHPDVSLIVLLIDERPEEVTEMTRSVKGEVVASTFDEPATRHV
QVAEMVLEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRQYPAINV
NKSGTRREELLIEKDILQKIWVLRKLLYPMDDLEAMEFLLDKLKATKNNADFFDSMRRG
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgcatttatccgatctaaaacatcttcccgtgaccgaactggtcgaaatggcgatcgcc
aacgagattgaaggcgcgagccgcatgcgcaagcaggaccttatcttcgctctgctgaaa
aacaaagccaaaaagggagacagcatttttggggatggcacgctggaagtattgcaggat
ggatttgggtttttacgttcacccgacacttcctacctggcaggtccggacgacatctat
gtttccccttcgcaaattcgacgcttcaacctgcatactggcgactccatcatgggggag
attcgcacccccaaagacggcgaacgctactttgccctggtaaaagtcgacagcgtcaac
ggcgaagcccccgaaaacaccaagcacaaaatcctgtttgaaaacctcacccctctcttc
cccaccaagcctctcgtactcgaacgcgatattcgcggtgaagagaatgtgaccggccgc
gtcattgacatgattgcgcctatcggcaaaggccagcgcgctttgctggtggccccgccg
aaatccggcaaaacggtcatgatgcaacacattgcccatgccattaccgccaatcacccg
gacgtcagcctgatcgtgctgctgattgacgaacgtccggaagaagtgacagaaatgacc
cgctcggtgaagggcgaagtggttgcatccactttcgacgaacccgccacccgccacgtt
caggtcgccgaaatggtgctggaaaaagccaagcgcctggtcgagcacaaaaaagatgtg
gtgatcctgctggattcgatcacacgtctggcgcgtgcctacaacacggtagtaccggcc
tcaggcaaggtactgactggcggcgtagatgccaatgcattgcaacgtcccaagcgtttc
tttggcgctgcccgcaatattgaagaaggcggctcgctgactatcattgccaccgcgctg
gtcgataccggctcccgcatggatgatgtgatttacgaagaattcaagggcactggcaat
atggaaatccacctggatcgccgtatggccgaaaagcgccaataccccgccatcaacgtc
aacaaatccggcacccgccgcgaagagttgctgattgaaaaagacatcctgcaaaaaatc
tgggtactgcgcaaactgctctaccccatggatgatctcgaagcgatggagttcctgctg
gacaagctcaaggccaccaagaacaacgccgatttcttcgactccatgcgtcgaggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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