KEGG   Methylophaga nitratireducenticrescens: Q7A_1301
Entry
Q7A_1301          CDS       T02055                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
mej  Methylophaga nitratireducenticrescens
Pathway
mej03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mej00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Q7A_1301 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mej03019]
    Q7A_1301 (pnp)
   03016 Transfer RNA biogenesis [BR:mej03016]
    Q7A_1301 (pnp)
Enzymes [BR:mej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Q7A_1301 (pnp)
Messenger RNA biogenesis [BR:mej03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Q7A_1301 (pnp)
Transfer RNA biogenesis [BR:mej03016]
 Prokaryotic type
  tRNA degradation factors
   Q7A_1301 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 KhpA-B_KH S1_2
Other DBs
NCBI-ProteinID: AFI84135
UniProt: I1XIB6
Position
1298859..1300952
AA seq 697 aa
MNSVKKTVQFGEHILSLETGKIARQAGGSIIASLGETSVLVTVVGKKNVNPGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPLRPLFPKGFINEVQVIATVMALD
PEIDPDIPAMIGASAALAISGIPFNGPLGAARVGYVDGNYILNPSKKQLAASSLDLVVAG
TESAVLMVESEASELPEEVMLGSVMYGHQQIQTAIKLIDELKAETAKTAWEWTAPEKDDR
LYNAVKDQAFEGIKNAYAISDKMQRQDQLAEIRQAAIAALVSEDGEWSEDDVKGVFGKLE
KELVRGRIIAGEPRIDGRDTKTVRPVFVETTVLPRVHGSALFTRGETQAIVVATLGAERD
AQMIDAVEGEYRDRFMLHYNFPPFCVGETGFVGTPKRREIGHGKLAKRGIQAVMPSAEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKAPVAGIAMGLIKEPDAYAVLTDI
LGDEDHLGDMDFKVAGTEKGVTALQMDIKIEGINEEIMRTALAQARDGRLHILEKMNAVI
STHRQEMSEFAPRIITVKIHADKIRDVIGKGGATIRAITEETGATIDIQDDGTVMIFSSD
FNAGQDALHRIEQITAEVEVGKIYQGRVAKLMDFGAFVTILPGKDGLVHISQISDERVEN
VSDKLSEGDMIDVKVLEVDRQGRIRLSMKAVNEVTAD
NT seq 2094 nt   +upstreamnt  +downstreamnt
gtgaattcagtaaaaaagacagttcagttcggtgagcacattctcagcctggaaaccgga
aaaattgcccgtcaggccggtggttcgattattgccagtctgggcgagacatcagtgctg
gtaactgtagtcggaaagaaaaatgttaaccctggtcaggatttctttccgttaaccgta
aattatcaagaacgtacctatgctgcaggtaaaatccctggtggttttttcaaacgtgaa
ggtcgtccttctgagaaagaaacactgacctcccgtctgatcgatcgtccactgcgtcca
ttgtttcctaaaggtttcatcaacgaagtacaggttatcgccaccgtaatggctttggat
cctgaaatcgatccggatatcccggcaatgattggtgcttctgctgctttggcgatttcc
ggtattccgtttaacggcccattaggtgctgcccgagtgggctatgttgatggtaactac
atcctcaatccatccaaaaaacaattggcggccagttcgctggacttggtcgttgccggt
actgaaagtgctgtattgatggtggagtccgaagcatctgaattgcctgaagaggttatg
ttgggttctgtcatgtatggacatcagcaaattcagacagcgatcaaactgatcgatgaa
ttgaaagcagaaacggctaaaacagcctgggaatggactgctccggaaaaagatgatcgt
ttgtataacgctgttaaagatcaagcgtttgaaggtattaaaaatgcctatgccatcagt
gacaaaatgcagcgtcaggatcaactggctgaaattcgccaggcagctattgccgcattg
gtcagtgaagatggtgaatggtctgaagatgacgtaaaaggcgtgtttggaaaactggaa
aaagaactggttcgtggccgtattattgctggtgaaccacgtatcgatggtcgtgatacc
aaaacggtacgtccagtttttgttgaaactactgtactgccccgtgttcatggttctgcc
ttgtttacccgtggtgagactcaagcaatcgtggtggccactttaggtgctgaacgtgat
gcacagatgatcgatgccgtcgaaggtgaataccgtgatcgtttcatgctgcattataat
tttcctccgttctgtgttggtgaaaccggttttgtgggtacaccaaaacgccgtgaaatt
ggtcatggtaaattggccaaacgtggtattcaggccgttatgccatcagctgaagaattc
ccgtatgtggttcgtgtagtatctgaaatcaccgaatccaatggttcgagttcaatggct
tctgtgtgtggtacatccttggcgttaatggatgccggtgtaccaattaaagcacctgtt
gccggtattgctatgggtctgattaaagaaccggatgcttatgctgtgttgactgatatt
ctgggtgatgaagatcacctgggcgatatggattttaaagtcgcggggaccgaaaaaggt
gtgaccgcactgcaaatggatatcaagatcgaaggtatcaacgaagaaatcatgcgtacc
gcactggcgcaagcccgtgatggtcgtctgcatattctggaaaaaatgaatgcagtgatt
tcaacgcaccgtcaggaaatgtctgaatttgcaccacgtattatcactgtgaaaattcat
gctgataaaattcgtgatgtaatcggaaaaggtggtgcgaccattcgtgctatcaccgaa
gaaaccggtgcgaccattgatatccaggatgatggcaccgtgatgattttctcttccgat
ttcaatgccggtcaggatgctctgcaccgtattgagcaaatcactgcagaagttgaagtc
ggcaagatctatcagggccgtgttgccaagctgatggacttcggtgcgtttgttaccatt
ctgccgggtaaagatggtctggtacatatttcacaaatctcggatgagcgtgtggaaaat
gtcagtgataaactgtctgaaggtgacatgattgatgttaaggttttggaagttgatcgc
cagggccgtattcgtctgagcatgaaagctgttaacgaagttactgcagactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (104)   
   KEGG ORTHOLOGY (1)   
   RefGene (101)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (120)   

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